Job Description P0ACM2 Confidence 65.93% Date Thu Jan 5 11:18:30 GMT 2012 Rank 293 Aligned Residues 111 % Identity 12% Template c2zhhA_ PDB info PDB header:transcription Chain: A: PDB Molecule:redox-sensitive transcriptional activator soxr; PDBTitle: crystal structure of soxr Resolution 3.20 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	E	K	E	V	S	V	R	F	N	V	S	R	Q	P	V	R	E	A	F	I	K	L	A	E	N	G	L	I	Q	I	R	P	Q	R	G	S	Y	V	N	K	I	S	M	A	Q	V	R	N	G	S	F	I	R	Q	A	I	E	C	A	V	A	R	R	A	A	S	M	I	T	E	S	Q	C	Y	Q	L	E	Q
Query Conservation
Alig confidence																						.	.	.	.
Template Conservation																						.	.	.	.
Template Sequence		L	T	P	G	E	V	A	K	R	S	G	V	A	V	S	A	L	H	F	Y	.	.	.	.	E	S	K	G	L	I	T	S	I	R	N	S	G	N	Q	R	R	Y	K	R	D	V	L	R	Y	V	A	I	I	K	I	A	Q	R	I	G	I	P	L	A	T	I	G	E	A	F	G	V	T	L	S	A	K	E	W	K
Template Known Secondary structure												T	S									.	.	.	.			T	T	S	S						T	T	T						T	T														T	T										T	T
Template Predicted Secondary structure																						.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.					.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	H	Q	Q	R	I	A	I	E	R	K	Q	L	D	D	F	F	E	L	D	D	N	F	H	Q	L	L	T	Q	I	A	D	C	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	L	S	S	Q	W	R	E	E	L	D	R	R	I	H	T	L	V	A	L	R	D	E	L	D	G	C	I	G	C	G	C	L	S	R
Template Known Secondary structure																																				T
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions