Job Description P0AC47 Confidence 99.89% Date Wed Jan 25 15:20:23 GMT 2012 Rank 12 Aligned Residues 201 % Identity 16% Template c3kwlA_ PDB info PDB header:unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a hypothetical protein from helicobacter pylori Resolution 1.94 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.				.	.	.	80	.	.
Predicted Secondary structure																																																																									.	.	.
Query SS confidence																																																																									.	.	.
Query Sequence		N	L	K	I	E	V	V	R	Y	N	P	E	V	D	T	A	P	H	S	A	F	Y	E	V	P	Y	D	A	T	T	S	L	L	D	A	L	G	Y	I	K	D	N	L	A	P	D	L	S	Y	R	W	S	C	R	M	A	I	C	G	S	C	G	M	M	V	N	N	V	P	K	L	.	.	.	A	C	K	T	F	L
Query Conservation																																																																									.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.										.	.	.	.										.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.										.	.	.	.
Template Sequence		K	L	H	V	K	V	F	R	F	E	T	N	K	D	Y	N	P	A	Y	E	S	Y	F	L	E	Y	Q	E	D	Q	Y	L	L	D	L	L	K	Q	L	K	.	.	.	.	.	.	.	.	.	G	V	S	Y	S	E	N	I	A	.	.	.	.	L	K	I	N	Q	I	A	V	F	E	D	A	K	V	S	D	L	V
Template Known Secondary structure											B	T	T	S		S													T	T		B						T	T	S	T	.	.	.	.	.	.	.	.	.	T					S	S			.	.	.	.				T	T					S			B
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.										.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.										.	.	.	.	.	50	.	.	.					.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	Y	T	D	G	M	K	V	E	A	L	A	N	F	P	I	E	R	D	L	V	V	D	M	T	H	F	I	E	S	L	E	A	I	K	P	Y	I	I	G	N	S	R	T	A	D	Q	G	T	N	I	Q	T	P	A	Q	M	A	K	Y	H	Q	F	S	G	C	I	N	C	G	L	C	Y	A	A	C	P	Q	F
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template Sequence		A	F	F	S	K	E	W	V	L	D	P	L	S	K	R	Y	A	L	K	D	L	X	I	D	E	K	A	V	L	K	N	Y	E	D	F	F	K	Q	V	.	.	.	.	.	.	.	.	P	Y	I	T	K	G	E	K	E	E	L	E	K	F	I	Q	I	N	.	.	.	.	.	.	.	.	.	F	I	N	P	Q	T
Template Known Secondary structure						S							S		S	T	T				T	T									G	G	G						T		.	.	.	.	.	.	.	.	T	T	S							G	G	G	G	T	G	G	G	G	.	.	.	.	.	.	.	.	.	G	T
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110									.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.										.	130	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	N	P	E	F	I	G	P	A	A	I	T	L	A	H	R	Y	N	E	D	S	R	D	H	G	K	K	E	R	M	A	Q	L	N	S	Q	N	G	V	W	S	C	T	F	V	G	Y	C	S	E	V	C	P	K	H	V	D	P	A	A	A	I	Q	Q	G	K	V	E	S	S	K	D	F	L	I	A	T
Query Conservation
Alig confidence		.	.																																														.	.
Template Conservation		.	.																																														.	.
Template Sequence		.	.	N	P	K	Y	L	G	D	G	F	F	L	Y	V	K	W	L	X	K	R	Y	P	T	E	R	D	R	L	L	E	X	I	S	Q	P	E	S	G	V	X	N	F	L	S	V	A	.	.	H	Y	L	Y	K	N	D	D	N	I	D	H	E	I	Y	E	L	Q	E	I	L	T	N	S	K	I	K	P	W
Template Known Secondary structure		.	.		T	T																		G	G	G								T			T	T	T	S	G	G	G					G	.	.	G	G	B	T	T																		T	S	S		T	T
Template Predicted Secondary structure		.	.																																														.	.
Template SS confidence
				135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.			180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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