Job Description P0AC47 Confidence 99.61% Date Wed Jan 25 15:20:23 GMT 2012 Rank 21 Aligned Residues 131 % Identity 20% Template c3hrdH_ PDB info PDB header:oxidoreductase Chain: H: PDB Molecule:nicotinate dehydrogenase small fes subunit; PDBTitle: crystal structure of nicotinate dehydrogenase Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	E	M	K	N	L	K	I	E	V	V	R	Y	N	P	E	V	D	T	A	P	H	S	A	F	Y	E	V	P	Y	D	A	T	T	S	L	L	D	A	L	G	Y	I	K	D	N	L	A	P	D	L	S	Y	R	W	S	C	R	M	A	I	C	G	S	C	G	M	M	V	N	N	V	P	K	L	A	C	K	T
Query Conservation
Alig confidence						.							.	.	.			.	.	.	.	.	.	.	.																			.	.	.	.
Template Conservation						.							.	.	.			.	.	.	.	.	.	.	.																			.	.	.	.
Template Sequence		M	N	K	I	.	T	I	N	L	N	L	.	.	.	N	G	.	.	.	.	.	.	.	.	E	A	R	S	I	V	T	E	P	N	K	R	L	L	D	L	L	R	.	.	.	.	E	D	F	G	L	T	S	V	K	E	G	C	S	E	G	E	C	G	A	C	T	V	I	F	N	G	D	P	V	T	T	C	C	M
Template Known Secondary structure						.							.	.	.	T	T	.	.	.	.	.	.	.	.									S	S	S	B							.	.	.	.		T	S			T	T	S			S	S	S	S	S	S	S		T	T					T	T					G	G	G	S
Template Predicted Secondary structure						.							.	.	.			.	.	.	.	.	.	.	.																			.	.	.	.
Template SS confidence
		1	.	.	.		.	.	.	.	.	10				.	.									.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30					.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
		81	.	.			.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		F	L	R	.	.	D	Y	T	D	G	M	K	V	E	A	L	A	N	F	P	I	E	R	D	L	V	V	D	M	T	H	F	I	E	S	L	E	A	I	K	P	Y	I	I	G	N	S	R	T	A	D	Q	G	T	N	I	Q	T	P	A	Q	M	A	K	Y	H	Q	F	S	G	C	I	N	C	G	L	C	Y	A	A
Query Conservation					.	.
Alig confidence					.	.																					.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Template Sequence		L	A	G	Q	A	D	E	S	T	I	I	T	L	E	G	V	A	E	D	G	K	P	S	L	L	.	.	.	.	.	.	.	.	.	.	Q	Q	C	F	L	E	A	G	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	C	G	Y	C	T	.	.
Template Known Secondary structure		B	G	G	G	G	T	T						G	G	G	T	S	B	T	T	B					.	.	.	.	.	.	.	.	.	.								T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S		S	S		.	.
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.											90	.	.	.	.	.	.	.	.	.																												100	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	P	Q	F	G	L	N	P	E	F	I	G	P	A	A	I	T	L	A	H	R	Y	N	E	D	S	R	D	H	G	K	K	E	R	M	A	Q	L	N	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	P	G	M	I	L	T	A	K	A	L	L	D	K	N	P	D	P	T	D	E	E	I	T	V	A	M	S	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.												T	T		S	S											T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions