Job Description P0AC47 Confidence 79.96% Date Wed Jan 25 15:20:23 GMT 2012 Rank 133 Aligned Residues 88 % Identity 16% Template c2l52A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:methanosarcina acetivorans samp1 homolog; PDBTitle: solution structure of the small archaeal modifier protein 1 (samp1)2 from methanosarcina acetivorans Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.							.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.
Query Sequence		E	M	K	N	L	K	I	E	V	V	R	Y	N	P	E	V	D	T	A	P	H	S	A	F	Y	E	V	P	Y	D	A	T	T	S	L	L	D	A	L	G	Y	I	K	D	N	L	A	P	D	L	S	Y	R	W	S	C	R	M	A	.	.	.	.	.	.	I	C	G	S	C	G	M	M	V	N	N	V	P	K	L
Query Conservation																																																													.	.	.	.	.	.
Alig confidence																					.	.	.							.	.	.																													.	.	.	.	.	.
Template Conservation																					.	.	.							.	.	.
Template Sequence		H	M	A	E	V	K	V	K	L	F	A	N	L	R	E	A	A	G	T	.	.	.	P	E	L	P	L	S	.	.	.	G	E	K	V	I	D	V	L	L	S	L	T	D	K	Y	P	A	L	K	Y	V	I	F	E	K	G	D	E	K	S	E	I	L	I	L	C	G	S	I	N	I	L	I	N	G	N	N	I	R
Template Known Secondary structure												T							S	S	.	.	.	S						.	.	.		S	S													G	G	G	T	T	T	S	B		S			T	T	S	S				B		S	S						T	T	S		G	G
Template Predicted Secondary structure																					.	.	.							.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20				.	.	.	.	.	.				.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
					77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	A	C	K	T	F	L	R	D	Y	T	D	G	M	K	V	E	A	L	A	N
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		H	L	E	G	L	E	T	L	L	K	D	S	D	E	I	G	I	L	P	P	V	S	G
Template Known Secondary structure		G	T	T	S	T	T	S				T	T										S
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions