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Job Description | P0AC47 | Confidence | 79.96% | Date | Wed Jan 25 15:20:23 GMT 2012 |
Rank | 133 | Aligned Residues | 88 |
% Identity | 16% | Template | c2l52A_ |
PDB info |
PDB header:protein binding | Chain: A: PDB Molecule:methanosarcina acetivorans samp1 homolog; |
PDBTitle: solution structure of the small archaeal modifier protein 1 (samp1)2 from methanosarcina acetivorans
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Resolution | UNK |
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3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | |
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Predicted Secondary structure |   |
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Query Sequence |   |
E | M | K | N | L | K | I | E | V | V | R | Y | N | P | E | V | D | T | A | P | H | S | A | F | Y | E | V | P | Y | D | A | T | T | S | L | L | D | A | L | G | Y | I | K | D | N | L | A | P | D | L | S | Y | R | W | S | C | R | M | A | . |
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I | C | G | S | C | G | M | M | V | N | N | V | P | K | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
H | M | A | E | V | K | V | K | L | F | A | N | L | R | E | A | A | G | T | . |
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G | E | K | V | I | D | V | L | L | S | L | T | D | K | Y | P | A | L | K | Y | V | I | F | E | K | G | D | E | K | S | E | I | L | I | L | C | G | S | I | N | I | L | I | N | G | N | N | I | R |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | |
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77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
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A | C | K | T | F | L | R | D | Y | T | D | G | M | K | V | E | A | L | A | N |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
H | L | E | G | L | E | T | L | L | K | D | S | D | E | I | G | I | L | P | P | V | S | G |
Template Known Secondary structure |   |
G | T | T | S | T | T | S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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76 | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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