 |
Job Description | P0AC47 | Confidence | 68.68% | Date | Wed Jan 25 15:20:23 GMT 2012 |
Rank | 137 | Aligned Residues | 62 |
% Identity | 18% | Template | c2kmmA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:guanosine-3',5'-bis(diphosphate) 3'- |
PDBTitle: solution nmr structure of the tgs domain of pg1808 from2 porphyromonas gingivalis. northeast structural genomics3 consortium target pgr122a (418-481)
|
Resolution | UNK |
|
 |
  |   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | E | V | V | R | Y | N | P | E | V | D | T | A | P | H | S | A | F | Y | E | V | P | Y | D | A | T | T | S | L | L | D | A | L | G | Y | I | K | D | N | L | A | P | D | L | S | Y | R | W | S | C | R | M | A | I | C | G | S | C | G | M | M | V | N | N | V | P | K | L | A | C | K | T | F | L | R | D | Y | T | D | G |
Query Conservation |   |
  |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |
|
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |
|   |
|
|   |
|   |
|   |
|
|
|   |   |   |
|
|
|   |
|   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|   |
|
|
|
|   | . | . | . | . | . | . | . | . |   |   |   |
|
|   |
|
|
|   |   |
|   |
|   |   |
|
|   |   |
|
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|   |   |
| . |   |
|   |   |   |
|   |   |
|
|   |
|
Template Sequence |   |
M | E | V | M | V | F | T | P | K | G | E | . |
. |
. |
. |
. |
. |
. |
. |
I | K | R | L | P | Q | G | A | T | A | L | D | F | A | Y | S | L | H | S | D | L | G | D | H | C | I | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | K | V | N | H | K | L | V | . |
P | L | S | Y | V | L | N | S | G | D | Q | V |
Template Known Secondary structure |   |
|
|  |  |  |  |
| T | T |
|
| . | . | . | . | . | . | . | . |  |  |  |  |
| T | T |
| B |  |  |  |  |  |  |  |  |
| S |  |  |  |  | T |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  | T | T |  |  |
| . |
| T | T |
| B |
|
| S | S | S | B |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
|  |  |
| . |
|
|
|
|
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
417 | . | . | 420 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 460 | . | . | |
. | . | . | . | . | . | . | 470 | . | . | . | . |
  |
  |   |
89 | 90 | . | . |
Predicted Secondary structure |   |
 |  |  |  |
Query SS confidence |   |
|
|
|
|
Query Sequence |   |
M | K | V | E |
Query Conservation |   |
  |
|
|
|
Alig confidence |   |
|
|
|
|
Template Conservation |   |
|
|
|
|
Template Sequence |   |
E | V | L | S |
Template Known Secondary structure |   |
 |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
Template SS confidence |   |
|
|
|
|
  |   |
475 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|