Job Description P0AC47 Confidence 100.00% Date Wed Jan 25 15:20:23 GMT 2012 Rank 2 Aligned Residues 235 % Identity 30% Template c2h89B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:succinate dehydrogenase ip subunit; PDBTitle: avian respiratory complex ii with malonate bound Resolution 2.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.																.
Query SS confidence																			.																.
Query Sequence		A	E	M	K	N	L	K	I	E	V	V	R	Y	N	P	E	V	.	D	T	A	P	H	S	A	F	Y	E	V	P	Y	D	A	.	T	T	S	L	L	D	A	L	G	Y	I	K	D	N	L	A	P	D	L	S	Y	R	W	S	C	R	M	A	I	C	G	S	C	G	M	M	V	N	N	V	P	K	L	A	C	K
Query Conservation																			.																.
Alig confidence																			.																.
Template Conservation
Template Sequence		A	T	S	R	I	K	K	F	S	I	Y	R	W	D	P	D	K	P	G	D	K	P	R	M	Q	T	Y	E	V	D	L	N	K	C	G	P	M	V	L	D	A	L	I	K	I	K	N	E	L	D	S	T	L	T	F	R	R	S	C	R	E	G	I	C	G	S	C	A	M	N	I	A	G	G	N	T	L	A	C	T
Template Known Secondary structure		.														T	T	S	T	T												G	G	G	S		S	B												T		T	T								S	S	S	S	S		T	T					T	T					T	T	T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure											.																																									.
Query SS confidence											.																																									.
Query Sequence		T	F	L	R	D	Y	T	D	G	.	M	K	V	E	A	L	A	N	F	P	I	E	R	D	L	V	V	D	M	T	H	F	I	E	S	L	E	A	I	K	P	Y	I	I	G	N	S	R	T	A	.	D	Q	G	T	N	I	Q	T	P	A	Q	M	A	K	Y	H	Q	F	S	G	C	I	N	C	G	L	C	Y	A
Query Conservation											.																																									.
Alig confidence											.																																									.
Template Conservation
Template Sequence		K	K	I	D	P	D	L	S	K	T	T	K	I	Y	P	L	P	H	M	Y	V	V	K	D	L	V	P	D	L	S	N	F	Y	A	Q	Y	K	S	I	E	P	Y	L	K	K	K	D	E	S	K	Q	G	K	E	Q	Y	L	Q	S	I	E	D	R	Q	K	L	D	G	L	Y	E	C	I	L	C	A	C	C	S	T
Template Known Secondary structure		S	B					T	T	S							S	S	S						T	T													T	T			S				S			T	T	T	T	S	S											T	T	T	T	T	T	T						T	T	G	G
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		158	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		A	C	P	Q	F	G	L	N	.	P	E	F	I	G	P	A	A	I	T	L	A	H	R	Y	N	E	D	S	R	D	H	G	K	K	E	R	M	A	Q	L	N	S	Q	N	G	V	W	S	C	T	F	V	G	Y	C	S	E	V	C	P	K	H	V	D	P	A	A	A	I	Q	Q	G	K	V	E	S	S	K	D	F
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		S	C	P	S	Y	W	W	N	G	D	K	Y	L	G	P	A	V	L	M	Q	A	Y	R	W	M	I	D	S	R	D	D	Y	T	E	E	R	L	A	Q	L	Q	D	P	F	S	L	Y	R	C	H	T	I	M	N	C	T	R	T	C	P	K	G	L	N	P	G	K	A	I	A	E	I	K	K	M	M	A	T	Y	K
Template Known Secondary structure		G								T	T	T															S		T	T		S								T	T		S	T	T	T	T	T	T												T	T
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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