Job Description P0A6Q6 Confidence 97.62% Date Thu Jan 5 11:03:42 GMT 2012 Rank 26 Aligned Residues 127 % Identity 13% Template c3bnvD_ PDB info PDB header:unknown function Chain: D: PDB Molecule:cj0977; PDBTitle: crystal structure of cj0977, a sigma28-regulated virulence protein2 from campylobacter jejuni. Resolution 2.60 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		Q	I	E	E	I	L	E	L	L	P	H	R	F	P	F	.	.	L	L	V	D	R	V	L	D	F	E	E	G	R	F	L	R	A	V	K	N	V	S	V	N	E	P	F	F	Q	G	H	F	P	G	K	P	I	F	P	G	V	L	I	L	E	A	M	A	Q	A	T	G	I	L	A	F	K	S	V	G	K	L	E
Query Conservation																	.	.
Alig confidence																	.	.													.												.	.	.	.	.																											.	.	.	.	.	.	.	.
Template Conservation																															.												.	.	.	.	.																											.	.	.	.	.	.	.	.
Template Sequence		D	I	S	R	V	R	A	E	L	L	T	C	P	E	L	N	T	S	L	A	G	T	I	I	E	I	D	K	N	.	Y	A	K	S	I	L	I	T	T	S	E	.	.	.	.	.	X	V	A	D	D	Q	G	L	I	F	D	A	F	I	F	A	A	A	N	Y	V	A	Q	A	S	I	.	.	.	.	.	.	.	.
Template Known Secondary structure												S		T	T														T	T	.										G	G	.	.	.	.	.	G	B	S	S	T	T		B	B		T																.	.	.	.	.	.	.	.
Template Predicted Secondary structure																															.												.	.	.	.	.																											.	.	.	.	.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60						.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		P	G	E	L	Y	Y	F	A	G	I	D	E	A	R	F	K	R	P	V	V	P	G	D	Q	M	I	M	E	V	T	F	E	K	T	R	.	R	G	L	T	R	F	K	G	V	A	L	V	D	G	K	V	V	C	E	A	T	M	M	C	A	R	S	R	E
Query Conservation																																					.
Alig confidence		.																																			.
Template Conservation		.
Template Sequence		.	N	K	E	F	S	V	I	I	G	S	K	C	F	F	Y	A	P	L	K	L	G	D	V	L	E	L	E	A	H	A	L	F	D	E	T	S	K	K	R	D	V	K	V	V	G	H	V	K	E	I	K	X	F	E	G	T	I	Q	V	V	S	T	D	E
Template Known Secondary structure		.			S	S												S			B	T	T													S	S		S											T	T														S	S
Template Predicted Secondary structure		.
Template SS confidence
			87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions