Job Description Q46806 Confidence 99.77% Date Thu Jan 5 12:34:31 GMT 2012 Rank 70 Aligned Residues 306 % Identity 14% Template d4ubpc2 SCOP info TIM beta/alpha-barrel Metallo-dependent hydrolases alpha-subunit of urease, catalytic domain Resolution 1.55

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.						.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.
Query Sequence		G	G	V	D	V	H	T	H	F	N	I	D	V	G	I	A	R	S	C	D	D	F	F	T	G	T	R	A	A	A	C	G	G	T	T	T	I	I	D	H	M	G	F	G	P	N	G	C	R	L	R	.	.	.	.	.	H	Q	L	E	V	Y	R	G	Y	A	A	H	K	A	V	I	D	Y	S	F	H	G	V	I
Query Conservation																																																					.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	G	I	D	T	H	V	H	F	I	N	P	.	.	.	.	.	.	.	.	.	.	.	D	Q	V	D	V	A	L	A	N	G	I	T	T	L	F	G	G	G	T	G	P	A	E	G	S	K	A	T	T	V	T	P	G	P	W	N	I	E	K	M	L	K	S	T	E	G	L	P	I	N	V	G	I	L	G	K	G
Template Known Secondary structure													T	.	.	.	.	.	.	.	.	.	.	.	T								T	T										S	S							S	S																T	T		S	S					B
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.												.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	H	I	N	H	A	I	L	D	E	I	P	M	I	V	E	E	G	L	S	S	F	K	L	Y	L	T	Y	Q	Y	K	L	N	D	D	E	V	L	Q	A	L	R	R	L	H	E	S	G	A	L	T	T	V	H	P	E	N	D	A	A	I	A	S	K	R	A	E	F	I	A	A	G	L	T	A	P	R	Y	H	A
Query Conservation
Alig confidence																					.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.
Template Sequence		H	G	S	S	I	A	P	I	M	E	Q	I	D	A	G	A	A	G	L	.	.	.	.	.	.	I	H	E	D	W	G	A	T	P	A	S	I	D	R	S	L	T	V	A	D	E	A	D	V	Q	V	A	I	H	S	D	T	L	N	E	A	G	F	L	E	D	T	L	R	A	I	N	G	R	V	I	H	S	F	H
Template Known Secondary structure				S	S											T			B		.	.	.	.	.	.		B	G	G	G																		T		B				B			T	T		S	S											T	T						T	T
Template Predicted Secondary structure																					.	.	.	.	.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.							220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	R	P	L	E	C	E	A	E	A	I	A	R	M	I	N	L	A	Q	I	A	G	N	A	P	L	Y	I	V	H	L	S	N	G	L	G	L	D	Y	L	R	L	A	R	A	N	H	Q	P	V	W	V	E	T	C	P	Q	Y	L	L	L	D	E	R	S	Y	D	T	E	D	G	M	K	F	I	L	S	P	P
Query Conservation
Alig confidence										.	.	.	.	.	.												.	.																					.	.																								.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.												.	.																					.	.																								.	.	.	.	.	.	.
Template Sequence		V	E	G	A	G	G	G	H	.	.	.	.	.	.	A	P	D	I	M	A	M	A	G	H	P	.	.	N	V	L	P	S	S	T	N	P	T	R	P	F	T	V	N	T	I	D	E	.	.	H	L	D	M	L	M	V	C	H	H	L	K	Q	N	I	P	E	D	V	A	F	A	D	.	.	.	.	.	.	.	S
Template Known Secondary structure		T	T	S	T	T	S	S	S	.	.	.	.	.	.	T	T	T	G	G	G	G	G	G	S	T	.	.	T				B			S	T	T	S	S		B	T	T					.	.										T			T	T	S									.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.	.	.	.	.												.	.																					.	.																								.	.	.	.	.	.	.
Template SS confidence
		276	.	.	.	280	.	.	.							.	.	.	.	.	.	290	.	.	.	.			.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.			.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.								.
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	N	V	R	E	Q	D	K	L	W	C	G	I	S	D	G	A	I	D	V	V	A	T	D	H	C	T	F	S	M	A	Q	R	L	Q	I	S	K	G	D	F	S	R	C	P	N	G	L	P	G	V	E	N	R	M	Q	L	L	F	S	S	G	V	M	T	G	R	I	T	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	I	R	P	E	T	I	A	A	E	D	I	L	H	D	L	G	I	I	S	M	M	S	T	D	A	L	A	M	G	R	A	G	E	M	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	T	W	Q	T	A	D	K	M	K	K	Q	R	G	P	L	A	E	E	K	N	G	S	D	N	F	R
Template Known Secondary structure			S														T	T	S	S		B					B	T	T	S	S		T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																S		T	T			S	S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.																	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	R	F	V	E	L	T	S	A	M	P	A	R	L	F	G	L	W	P	Q	K	G	L	L	A	P	G	S	D	G	D	V	V	I	I	D	P	R	Q	S	Q	Q	I	Q	H	R	H	L	H	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	R	Y	V	S	K	Y	T	I	N	P	A	I	A	Q	G	I	A	H	E	V	G	S	I	E	E	G	K	F	A	D	G	D	L	I	H	D	T	N	I	T	F	M	S	K	S	S	I	Q	Q
Template Known Secondary structure								T	T	T								T		T	T	T	S	S	S			T	T	S					T					S												T
Template Predicted Secondary structure
Template SS confidence
		403	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions