Job Description Q46806 Confidence 99.97% Date Thu Jan 5 12:34:31 GMT 2012 Rank 56 Aligned Residues 327 % Identity 41% Template d1ynya2 SCOP info TIM beta/alpha-barrel Metallo-dependent hydrolases Hydantoinase (dihydropyrimidinase), catalytic domain Resolution 2.30

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	V	D	V	H	T	H	F	N	I	D	V	G	I	A	R	S	C	D	D	F	F	T	G	T	R	A	A	A	C	G	G	T	T	T	I	I	D	H	M	G	F	G	P	N	G	C	R	L	R	H	Q	L	E	V	Y	R	G	Y	A	A	H	K	A	V	I	D	Y	S	F	H	G	V	I	Q	H	I	N	H
Query Conservation
Alig confidence																																															.
Template Conservation																																															.
Template Sequence		G	G	I	D	P	H	T	H	L	D	M	P	F	G	G	T	V	T	A	D	D	F	F	T	G	T	R	A	A	A	F	G	G	T	T	S	I	V	D	F	C	L	T	K	K	.	G	E	S	L	K	S	A	I	A	T	W	H	E	K	A	R	G	K	A	V	I	D	Y	G	F	H	L	M	I	A	E	A	N	D
Template Known Secondary structure										T	T				T	T				S													T	T												S	.	S															T	T	T		S	S									S
Template Predicted Secondary structure																																															.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		134	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.			.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure												.														.	.
Query SS confidence												.														.	.
Query Sequence		A	I	L	D	E	I	P	M	I	V	.	E	E	G	L	S	S	F	K	L	Y	L	T	Y	.	.	Q	Y	K	L	N	D	D	E	V	L	Q	A	L	R	R	L	H	E	S	G	A	L	T	T	V	H	P	E	N	D	A	A	I	A	S	K	R	A	E	F	I	A	A	G	L	T	A	P	R	Y	H	A	L	S
Query Conservation												.														.	.
Alig confidence												.														.	.
Template Conservation
Template Sequence		Q	V	L	E	E	L	E	S	V	I	S	S	E	G	I	T	S	L	K	V	F	M	A	Y	K	N	V	F	Q	A	D	D	E	T	L	F	K	T	L	V	K	A	K	E	L	G	A	L	V	Q	V	H	A	E	N	G	D	V	L	D	Y	L	T	K	K	A	L	A	E	G	N	T	D	P	I	Y	H	A	Y	T
Template Known Secondary structure													T	S									S		S	T	T	T	T																		T								S															T	T			S	T	T					T
Template Predicted Secondary structure
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280			.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																								.	.
Query SS confidence																																																																								.	.
Query Sequence		R	P	L	E	C	E	A	E	A	I	A	R	M	I	N	L	A	Q	I	A	G	N	A	P	L	Y	I	V	H	L	S	N	G	L	G	L	D	Y	L	R	L	A	R	A	N	H	Q	P	V	W	V	E	T	C	P	Q	Y	L	L	L	D	E	R	S	Y	D	T	E	D	G	.	.	M	K	F	I	L	S	P	P
Query Conservation																																																																								.	.
Alig confidence																								.																																																.	.
Template Conservation																								.
Template Sequence		R	P	P	E	A	E	G	E	A	T	G	R	A	I	A	L	T	A	L	A	G	S	.	Q	L	Y	V	V	H	V	S	C	A	S	A	V	Q	R	I	A	E	A	R	E	K	G	W	N	V	Y	G	E	T	C	P	Q	Y	L	A	L	D	V	S	I	M	D	Q	P	D	F	E	G	A	K	Y	V	W	S	P	P
Template Known Secondary structure		S																				T		.						S			S													T	T																G	G	G	G			S	S	S	G	G	G	G	G			S	S
Template Predicted Secondary structure																								.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	N	V	R	E	Q	D	K	L	W	C	G	I	S	D	G	A	I	D	V	V	A	T	D	H	C	T	F	S	M	A	Q	R	L	Q	I	S	K	G	D	F	S	R	C	P	N	G	L	P	G	V	E	N	R	M	Q	L	L	F	S	S	G	V	M	T	G	R	I	T	P	E	R	F	V	E	L	T	S	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	E	K	W	N	Q	E	V	L	W	S	A	L	K	N	G	I	L	Q	T	V	G	S	D	H	C	P	F	N	F	R	G	Q	K	E	L	G	R	G	D	F	T	K	I	P	N	G	G	P	L	I	E	D	R	L	T	I	L	Y	S	E	G	V	R	Q	G	R	I	S	L	N	Q	F	V	D	I	S	S	T
Template Known Secondary structure					T	T											T	T	S	S							B					T	T	T	T	G	G	G	G	T	T		G	G	G	S				B			T	T	T									T	T	T	T	T	S	S										T
Template Predicted Secondary structure
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
		369	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	P	A	R	L	F	G	L	W	P	Q	K	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	A	A	K	L	F	G	M	F	P	R	K	G	T
Template Known Secondary structure							T	T		T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions