 |
Job Description | Q46806 | Confidence | 41.89% | Date | Thu Jan 5 12:34:31 GMT 2012 |
Rank | 173 | Aligned Residues | 33 |
% Identity | 21% | Template | d1th7a1 |
SCOP info | Sm-like fold
| Sm-like ribonucleoproteins
| Sm motif of small nuclear ribonucleoproteins, SNRNP
|
Resolution | 1.68 |
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | |
|
. | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |
|
|  |  |  |
|
|
|
|
|  |  | . | . |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | R | V | L | I | K | N | G | T | V | V | N | A | D | G | Q | A | K | . |
. |
Q | D | L | L | I | E | S | G | I | V | R | Q | L | G | N |
Query Conservation |   |
|
|   |
|
|   |
|   |   |
|   |   |   |   |   |   |   |   | . | . |   |   |
|   |
|   |
|
|   |
|   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |
|   |   |
|   |
|
Template Sequence |   |
M | N | L | V | L | S | D | S | E | E | I | Q | S | D | G | S | G | K | K | L | G | T | I | V | I | R | G | D | N | V | I | L | I | S | P |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |
| S | S | S |
|  |  |  |  |  |  |  |  |  |
| G | G | G |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
43 | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|