Return to main results Retrieve Phyre Job Id

Job DescriptionQ46806
Confidence99.25%DateThu Jan 5 12:34:31 GMT 2012
Rank109Aligned Residues288
% Identity13%Templated1o12a2
SCOP infoTIM beta/alpha-barrel Metallo-dependent hydrolases N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   54.....60.........70.........80.........90.........100.........110.........120.........130...
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Query Sequence  GGVDVHTHFNIDVGIARSCDDFFTGTRAAACGGTTTIIDHMGFGPNGCRLRHQLEVYRGYAAHKAVIDYSFHGVIQHINH
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Template Sequence  GFVDPHIHGVVGAD. . TXNCDFSEXEEFLYSQGVTTFLATTVSTSLEKXKEILRKARDYILENPSTSLLGVHLEGPYISK
Template Known Secondary structure 

TT..TTTT
TTT

S


TT
S
SSS
G
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   44.....50....... ..60.........70.........80.........90.........100.........110.........120.
 
   134.....140.........150.........160.........170.........180.........190.........200.........210...
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Query Sequence  AILDEIPMIVEEGLSSFKLYLTYQYKLNDDEVLQALRRLHESGALTTVHPENDAAIASKRAEFIAAGLTAPRYHALSRPL
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Template Conservation   ....................                                                     
     
Template Sequence  E. . . . . . . . . . . . . . . . . . . . KKGAHSEKHIRPPSERELSEIDSPAKXLTFAPEIESSELLLRLVKRDIVLSAGHSIATF
Template Known Secondary structure  G....................G
TTS
TTT




TT

TT
TTSTTGGGGGGGGGGT

SB


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   122 .......130.........140.........150.........160.........170.........180.
 
   214.....220.........230.........240.........250.........260.........270.........280.........290...
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Query Sequence  ECEAEAIARMINLAQIAGNAPLYIVHLSNGLGLDYLRLARANHQPVWVETCPQYLLLDERSYDTEDGMKFILSPPLRNVR
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Template Sequence  EEFXKFYKEGVKRITHFPNGLKPLHHREIG. . . . . ITGAGLLLDDVKLELICDGVHLSREXVKLVY. . . . . . . . KVKKAN
Template Known Secondary structure  TTT

SSTTTTB



SS

.....
TT

SSSSS
........TGG
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   182.......190.........200.........210. ........220.........230.........240.. ......
 
   294.....300.........310.........320.........330.........340.........350.........360.........370...
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Query Sequence  EQDKLWCGISDGAIDVVATDHCTFSMAQRLQISKGDFSRCPNGLPGVENRMQLLFSSGVMTGRITPERFVELTSAMPARL
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Template Sequence  GIVLVTDSISAAGLKDGTTTLGDLVVKVK. . . . DGVPRLEDGTLAGSTLFFSQAVKNFRKFTGCSITELAKVSSYNSCVE
Template Known Secondary structure  G

B
TTTTS
S
SSSS....TT
TTS
B

B





T
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   249250.........260.........270....... ..280.........290.........300.........310.........320....
 
   374.....380.
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Query Sequence  FGLWPQKG
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Template Sequence  LGLDDR. G
Template Known Secondary structure  TT
TT
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   325....330 .
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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