Job Description Q46806 Confidence 99.97% Date Thu Jan 5 12:34:31 GMT 2012 Rank 58 Aligned Residues 320 % Identity 29% Template d1gkra2 SCOP info TIM beta/alpha-barrel Metallo-dependent hydrolases Hydantoinase (dihydropyrimidinase), catalytic domain Resolution 2.60

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	V	D	V	H	T	H	F	N	I	D	V	G	I	A	R	S	C	D	D	F	F	T	G	T	R	A	A	A	C	G	G	T	T	T	I	I	D	H	M	G	F	G	P	N	G	C	R	L	R	H	Q	L	E	V	Y	R	G	Y	A	A	H	K	A	V	I	D	Y	S	F	H	G	V	I	Q	H	I	N	H
Query Conservation
Alig confidence																	.																															.																																	.
Template Conservation																	.																															.																																	.
Template Sequence		G	V	V	D	E	H	V	H	I	I	D	M	D	L	K	.	N	R	Y	G	R	F	E	L	D	S	E	S	A	A	V	G	G	I	T	T	I	I	E	M	P	I	T	F	P	P	.	T	T	T	L	D	A	F	L	E	K	K	K	Q	A	G	Q	R	L	K	V	D	F	A	L	Y	G	G	G	V	P	G	N	.
Template Known Secondary structure													G	G	G	T	.	T	T	S														T								S		S	S	S		.	S		S																S	S					B					T	T		.
Template Predicted Secondary structure																	.																															.																																	.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.					160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.
Query SS confidence																												.	.	.	.
Query Sequence		A	I	L	D	E	I	P	M	I	V	E	E	G	L	S	S	F	K	L	Y	L	T	Y	Q	Y	K	.	.	.	.	L	N	D	D	E	V	L	Q	A	L	R	R	L	H	E	S	G	A	L	T	T	V	H	P	E	N	D	A	A	I	A	S	K	R	A	E	F	I	A	A	G	L	T	A	P	R	Y	H	A	L
Query Conservation																												.	.	.	.
Alig confidence		.	.																									.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	L	P	E	I	R	K	M	H	D	A	G	A	V	G	F	S	M	M	A	A	S	V	P	G	M	F	D	A	V	S	D	G	E	L	F	E	I	F	Q	E	I	A	A	C	G	S	V	I	V	V	H	A	E	N	E	T	I	I	Q	A	L	Q	K	Q	I	K	A	A	G	G	K	D	M	A	A	Y	E	A
Template Known Secondary structure		.	.										T	T			B			B	S	S		S	B	T	T	T	B		B																	T						B																	T	T			S
Template Predicted Secondary structure		.	.
Template SS confidence
				132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	P	L	E	C	E	A	E	A	I	A	R	M	I	N	L	A	Q	I	A	G	N	A	P	L	Y	I	V	H	L	S	N	G	L	G	L	D	Y	L	R	L	A	R	A	N	H	Q	P	V	W	V	E	T	C	P	Q	Y	L	L	L	D	E	R	S	Y	D	T	E	D	G	M	K	F	I	L	S	P	P	L
Query Conservation
Alig confidence																									.																																											.
Template Conservation																									.																																											.
Template Sequence		S	Q	P	V	F	Q	E	N	E	A	I	Q	R	A	L	L	L	Q	K	E	A	G	C	.	R	L	I	V	L	H	V	S	N	P	D	G	V	E	L	I	H	Q	A	Q	S	E	G	Q	D	V	H	C	E	S	G	P	Q	Y	L	N	I	T	T	D	D	A	.	E	R	I	G	P	Y	M	K	V	A	P	P	V
Template Known Secondary structure			S																						.									S													T	T													S			G	G	G		.				G	G	G	G			S	S
Template Predicted Secondary structure																									.																																											.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.		.	.	.	.	280	.	.	.	.	.	.	.	.
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	V	R	E	Q	D	K	L	W	C	G	I	S	D	G	A	I	D	V	V	A	T	D	H	C	T	F	S	M	A	Q	R	L	Q	I	S	K	G	D	F	S	R	C	P	N	G	L	P	G	V	E	N	R	M	Q	L	L	F	S	S	G	V	M	T	G	R	I	T	P	E	R	F	V	E	L	T	S	A	M
Query Conservation
Alig confidence																																								.
Template Conservation																																								.
Template Sequence		R	S	A	E	M	N	I	R	L	W	E	Q	L	E	N	G	L	I	D	T	L	G	S	D	H	G	G	H	P	V	E	D	K	E	P	G	W	K	.	D	V	W	K	A	G	N	G	A	L	G	L	E	T	S	L	P	M	M	L	T	N	G	V	N	K	G	R	L	S	L	E	R	L	V	E	V	M	C	E	K
Template Known Secondary structure																	T														G	G	G	T	G	G	G	G	T	.		G	G	G	S				B			T	T	T									T	G	G	G	T	S	S										T
Template Predicted Secondary structure																																								.
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.		.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
		370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	R	L	F	G	L	W	P	Q	K	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	A	K	L	F	G	I	Y	P	Q	K	G
Template Known Secondary structure							T		T	T	T
Template Predicted Secondary structure
Template SS confidence
		368	.	370	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions