 |
Job Description | Q46806 | Confidence | 95.91% | Date | Thu Jan 5 12:34:31 GMT 2012 |
Rank | 143 | Aligned Residues | 135 |
% Identity | 16% | Template | d1ejxc2 |
SCOP info | TIM beta/alpha-barrel
| Metallo-dependent hydrolases
| alpha-subunit of urease, catalytic domain
|
Resolution | 1.60 |
|
 |
  |   |
56 | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | |
|
|
|
|
|
. | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | D | V | H | T | H | F | N | I | D | V | G | I | A | R | S | C | D | D | F | F | T | G | T | R | A | A | A | C | G | G | T | T | T | I | I | D | H | M | G | F | G | P | N | G | C | R | L | . |
. |
. |
. |
. |
. |
R | H | Q | L | E | V | Y | R | G | Y | A | A | H | K | A | V | I | D | Y | S | F | H | G | V | I | Q |
Query Conservation |   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|   |
| . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |
|
|   |
|
|
|
|
|   |
|
|
|
|
|
|
|   |   |
|   |   |
|
|
|   |
|
|
|
|
|   |
|   |   |
|
|   |
|   |
|   |   |
|
|
|
| . | . | . | . |
|   |   |
|
Template Sequence |   |
I | D | T | H | I | H | W | I | C | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Q | Q | A | E | E | A | L | V | S | G | V | T | T | M | V | G | G | G | T | G | P | A | A | G | T | H | A | T | T | C | T | P | G | P | W | Y | I | S | R | M | L | Q | A | A | D | S | L | P | V | N | I | . |
. |
. |
. |
G | L | L | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |
| S |
| T | . | . | . | . | . | . | . | . | . | . | . | T |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |
|
| S | S | S |  |  |  |  |  | S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S | S |  |  | . | . | . | . |  |  | B |
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  | . | . | . | . |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1131 | . | . | . | . | . | . | . | . | 1140 | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 1150 | . | . | . | . | . | . | . | . | . | 1160 | . | . | . | . | . | . | . | . | . | 1170 | . | . | . | . | . | . | . | . | . | 1180 | . | . | . | . | . | . | . | . | . | 1190 | . | |
|
|
|
. | . | . | . |
  |
  |   |
130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | I | N | H | A | I | L | D | E | I | P | M | I | V | E | E | G | L | S | S | F | K | L | Y | L | T | Y | Q | Y | K | L | N | D | D | E | V | L | Q | A | L | R | R | L | H | E | S | G | A | L | T | T | V | H | P | E | N | D | A | A | I | A | S | K | R | A | E | F | I | A | A | G | L | T | A | P | R | Y | H | A |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|   |   |   |   |
|   |
|
|
|   |
|
|
|   |
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|   |
|   |   |
|
|
|
|
|
|
|
|
Template Sequence |   |
K | G | N | V | S | Q | P | D | A | L | R | E | Q | V | A | A | G | V | I | G | L | . |
. |
. |
I | H | E | D | W | G | A | T | P | A | A | I | D | C | A | L | T | V | A | D | E | M | D | I | Q | V | A | L | H | S | D | T | L | N | E | S | G | F | V | E | D | T | L | A | A | I | G | G | R | T | I | H | T | F | H |
Template Known Secondary structure |   |
|
|
|
| S | S |  |  |  |  |  |  |  |  |  |  | T |
| S | B |
| . | . | . |
| B | G | G | G |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| B |
|  |  | B |
|
| T | T |
| S | S |
|
|  |  |  |  |  |  |  |  | T | T |
|
|  |  |  | S | S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . |
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1196 | . | . | . | 1200 | . | . | . | . | . | . | . | . | . | 1210 | . | . | . | . | . | . | |
|
|
. | . | . | 1220 | . | . | . | . | . | . | . | . | . | 1230 | . | . | . | . | . | . | . | . | . | 1240 | . | . | . | . | . | . | . | . | . | 1250 | . | . | . | . | . | . | . | . | . | 1260 | . | . | . | . | . | . | . | . | . | 1270 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|