Return to main results Retrieve Phyre Job Id

Job DescriptionQ46806
Confidence95.91%DateThu Jan 5 12:34:31 GMT 2012
Rank143Aligned Residues135
% Identity16%Templated1ejxc2
SCOP infoTIM beta/alpha-barrel Metallo-dependent hydrolases alpha-subunit of urease, catalytic domain
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   56...60.........70.........80.........90.........100... ......110.........120.........
Predicted Secondary structure 

























......











Query SS confidence 















































. . . . . .

























Query Sequence  VDVHTHFNIDVGIARSCDDFFTGTRAAACGGTTTIIDHMGFGPNGCRL. . . . . . RHQLEVYRGYAAHKAVIDYSFHGVIQ
Query Conservation 

 
 
                        
 
               ......                          
Alig confidence 









...........


























......

















....



Template Conservation 







 
...........   
 

 




 






  
  


 




 
  

 
 
  



....
  
Template Sequence  IDTHIHWICP. . . . . . . . . . . QQAEEALVSGVTTMVGGGTGPAAGTHATTCTPGPWYISRMLQAADSLPVNI. . . . GLLG
Template Known Secondary structure 
S
T...........TTT



SSSSS


TTSSS....B
Template Predicted Secondary structure 




...........
























....
Template SS confidence 















































































   1131........1140 .........1150.........1160.........1170.........1180.........1190. ....
 
   130.........140.........150.........160.........170.........180.........190.........200........
Predicted Secondary structure 




























Query SS confidence 














































































Query Sequence  HINHAILDEIPMIVEEGLSSFKLYLTYQYKLNDDEVLQALRRLHESGALTTVHPENDAAIASKRAEFIAAGLTAPRYHA
Query Conservation                  
                                                              
Alig confidence 




















...






















































Template Conservation 


 
    
 


 


 

...












 

 



 














 




 
  







Template Sequence  KGNVSQPDALREQVAAGVIGL. . . IHEDWGATPAAIDCALTVADEMDIQVALHSDTLNESGFVEDTLAAIGGRTIHTFH
Template Known Secondary structure 



SST
SB
...
BGGG


T
B
B

TT
SS

TT

SS
Template Predicted Secondary structure 










...



















Template SS confidence 














































































   1196...1200.........1210...... ...1220.........1230.........1240.........1250.........1260.........1270.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions