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Job DescriptionQ46806
Confidence100.00%DateThu Jan 5 12:34:31 GMT 2012
Rank42Aligned Residues377
% Identity13%Templatec3v7pA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:amidohydrolase family protein; PDBTitle: crystal structure of amidohydrolase nis_0429 (target efi-500396) from2 nitratiruptor sp. sb155-2
Resolution1.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MRVLIKNGTVVNADGQAKQDLLIESGIVRQLGNNISPQL. . . PYEEIDATGCYVFPGGVDVHTHFNIDVGIA. . . . . . . .
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Template Sequence  MR. IIKPFAILTPQTIIQDKAVAFDKKIEAIDTVENLIKKYPNAAVEHDENSLLLPGFANPHLHLEFSANKATLQYGDFI
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SSSS
SSB

TTS

GGGTT
SS
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SS
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Query Sequence  . . . . . . . . . . . . . . . . RSCDDFFTGTRAAACGGTTTIIDHMGFGPNGCRLRHQLEVYRGYAAHKAVIDYSFHGVIQHINH
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Template Sequence  PWLYSVIRHREDLLPLCDGACLEQTLSSIIQTGTTAIGAISSYGEDL. . . . QACIDSALKVVYFNEVIGSNAATADVMYA
Template Known Secondary structure  S
TTSSSTT....BSS
B

GGG
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Query Sequence  AILDEIPMIVEEGLSSFKLY. . LTYQYKLNDDEVLQALRRLHESGALTTVHPENDAAIASKRAEFIAAGLTAPRYHALSR
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Template Sequence  SFLERFHQSKKHENERFKAAVAIHSPYSVHYILAKRALDIAKKYGSLVSVHFMESRAEREWLDKGSGEFAKFFKEFLNQT
Template Known Secondary structure  TT
BTT

TTTB
T

S
SS
ST


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Query Sequence  PLECEAEAIARMINLAQIAGNAPLYIVHLSNGLGLDYLRLARANHQPVWVETCPQYLLLDERSYDT. . EDGMKFILSPPL
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Template Sequence  RPVNDTKSFLELF. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KELHTLFVHMVWANEEEIQTIASYNAHIIHCPIS
Template Known Secondary structure  S
SS
TT.................................TTS
TT

S
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Query Sequence  RNVREQDKLWCGISDGAIDVVATDHCTFSMAQRLQISKGDFSRCPNGLPGVENRMQLLFSSGVMTGRITPERFVELTSAM
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Template Sequence  NRLLGNGVLDLEKIKSIPYAIATDGLSSNYSLNMY. . . . . . . . . . . . . . . . EELKAALFVHPNKEATTFAKELIIRATKA
Template Known Secondary structure  TT




TTTTTTS




TTS
S


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T
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Query Sequence  PARLFGLWPQKGLLAPGSDGDVVIIDPRQSQQIQHRHLHDNADYSPWEGFTCQGAIVRTLSRGETIFCDGTF
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Template Sequence  GYDALGFEG. . GEIAVGKDADMQLIDLPEGLTNVEDLYLHVILHTT. . . . . . . . KPKKVYIQGEEHVRNLYF
Template Known Secondary structure  T
S
..SS

TTSB



TT


GGG
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STT



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Download:Text version

No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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