Job Description Q46806 Confidence 43.16% Date Thu Jan 5 12:34:31 GMT 2012 Rank 172 Aligned Residues 37 % Identity 16% Template c3swnA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:u6 snrna-associated sm-like protein lsm5; PDBTitle: structure of the lsm657 complex: an assembly intermediate of the lsm12 7 and lsm2 8 rings Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.				.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		M	R	V	L	I	K	N	G	T	V	V	N	A	D	G	.	.	.	Q	A	K	Q	D	L	L	I	E	S	G	I	V	R	Q	L	G	N	N	I	S	P
Query Conservation																	.	.	.
Alig confidence																	.	.	.
Template Conservation
Template Sequence		V	N	I	V	L	K	D	V	T	E	Y	D	T	V	T	G	V	T	E	K	H	S	E	M	L	L	N	G	N	G	M	C	M	L	I	P	G	G	K	P
Template Known Secondary structure														S	S	S													S	T	T							S
Template Predicted Secondary structure
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions