Phyre 2 alignment of Q46806 with c3nurA

Job Description Q46806
Confidence 29.52% Date Thu Jan 5 12:34:31 GMT 2012

Rank 184 Aligned Residues 282

% Identity 13% Template c3nurA_

PDB info PDB header:hydrolase Chain: A: PDB Molecule:amidohydrolase; PDBTitle: crystal structure of a putative amidohydrolase from staphylococcus2 aureus

Resolution 1.75 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	56	.	.	.	60	.	.	.	.	.					.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.									.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure											.	.	.	.																																											.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.																																											.	.	.	.	.	.	.	.
Query Sequence	V	D	V	H	T	H	F	N	I	D	.	.	.	.	V	G	I	A	R	S	C	D	D	F	F	T	G	T	R	A	A	A	C	G	G	T	T	T	I	I	D	H	M	G	F	G	P	N	G	C	R	L	R	H	Q	L	.	.	.	.	.	.	.	.	E	V	Y	R	G	Y	A	A	H	K	A	V	I	D	Y	S
Query Conservation											.	.	.	.																																											.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.																																											.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	I	T	F	E	E	H	Y	V	I	E	D	I	Q	K	E	T	N	A	D	E	L	S	H	H	D	E	R	I	Q	F	X	N	N	Q	D	V	Q	I	Q	V	L	S	Y	G	N	G	S	P	S	N	L	V	G	Q	K	A	I	E	L	C	Q	K	A	N	D	Q	L	A	N	Y	I	A	Q	Y	P	N	R	F	V	G
Template Known Secondary structure								B										T	T	B	T	T												T	T										T	T		G	G	G	S																							S	T	T	T
Template Predicted Secondary structure
Template SS confidence
	25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.

	124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																			.												.
Query SS confidence																			.												.
Query Sequence	F	H	G	V	I	Q	H	I	N	H	A	I	L	D	E	I	P	M	.	I	V	E	E	G	L	S	S	F	K	L	.	Y	L	T	Y	Q	Y	K	L	N	D	D	E	V	L	Q	A	L	R	R	L	H	E	S	G	A	L	T	T	V	H	P	E	N	D	A	A	I	A	S	K	R	A	E	F	I	A	A	G	L
Query Conservation																			.												.
Alig confidence																			.												.
Template Conservation
Template Sequence	F	A	T	L	P	I	N	E	P	E	A	A	A	R	E	F	E	R	C	I	N	D	L	G	F	K	G	A	L	I	X	G	R	A	Q	D	G	F	L	D	Q	D	K	Y	D	I	I	F	K	T	A	E	N	L	D	V	P	I	Y	L	H	P	A	P	V	N	S	D	I	Y	Q	S	Y	Y	K	G	N	Y	P	E
Template Known Secondary structure		B				T	T	S														T	T									S		B	T	T	B		T	T	S	G	G	G											T																			T			S	S
Template Predicted Secondary structure
Template SS confidence
	132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

	202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.					.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.			.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.																				.	.
Query SS confidence																						.	.	.	.																				.	.
Query Sequence	T	A	P	R	Y	H	A	L	S	R	P	L	E	C	E	A	E	A	I	A	R	.	.	.	.	M	I	N	L	A	Q	I	A	G	N	A	P	L	Y	I	V	H	L	S	.	.	N	G	L	G	L	D	Y	L	R	L	A	R	A	N	H	Q	P	V	W	V	E	T	C	P	Q	Y	L	L	L	D	E	R	S	Y
Query Conservation																						.	.	.	.																				.	.
Alig confidence																						.	.	.	.																				.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	V	T	A	A	T	F	A	C	F	G	Y	G	W	H	I	D	V	G	I	H	A	I	H	L	V	L	S	G	I	F	D	R	Y	P	K	L	N	X	I	I	G	H	W	G	E	F	I	P	F	F	L	E	R	X	D	E	A	L	F	A	E	H	L	N	.	.	.	.	.	.	.	.	.	.	.	.	.	H	S	V
Template Known Secondary structure								T	T	T	T																T	T					S	T	T							G	G	G	T	T	G	G	G	G								S			T	T	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.														.	.	.

	276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	D	T	E	D	G	M	K	F	I	L	S	P	P	L	R	N	V	R	E	Q	D	K	L	W	C	G	I	S	D	G	A	I	D	V	V	A	T	D	H	C	T	F	S	M	A	Q	R	L	Q	I	S	K	G	D	F	S	R	C	P	N	G	L	P	G	V	E	N	R	M	Q	L	L	F	S	S	G	V	M	T	G
Query Conservation
Alig confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	S	Y	Y	F	K	N	S	F	Y	I	T	P	S	G	X	L	T	K	P	Q	F	D	L	V	K	K	E	V	G	I	D	R	I	L	Y	A	A	D	Y	P	Y	I	E	P	E	K	L	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	L	D	E	L
Template Known Secondary structure							S						T	T																G	G	G	B		B				T	T	T				T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S	S
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.																											.	.	330	.	.

	356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	R	I	T	P	E	R	F	V	E	L	T	S	A	M	P	A	R	L	F	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence	G	L	T	D	E	E	K	E	K	I	S	Y	T	N	G	A	K	L	L	G	L
Template Known Secondary structure												T								T
Template Predicted Secondary structure
Template SS confidence
	333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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