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Job DescriptionQ46806
Confidence100.00%DateThu Jan 5 12:34:31 GMT 2012
Rank30Aligned Residues337
% Identity19%Templatec3nqbB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:adenine deaminase 2; PDBTitle: crystal structure of adenine deaminase from agrobacterium tumefaciens2 (str. c 58)
Resolution2.21 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  RVLIKNGTVVNADG. . QAKQDLLIESGIVRQLGNNISPQLPYEEIDATGCYVFPGGVDVHTHFNIDVGIARSCDDFFTGT
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Template Sequence  DVLITGGTLVDVVTGELRPADIGIVGALIASVHEPASRRDAAQVIDAGGAYVSPGLIDTHXHIESSXITP. . . . . . AAYA
Template Known Secondary structure  S
TTTT
TT
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GGGGTS
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Query Sequence  RAAACGGTTTIIDHMGFGPNGCRLRHQLEVYRGYAAHKAVIDYSFHGVIQHINH. . . . . . . . AILDEIPMIVEEGLSSFK
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Template Sequence  AAVVARGVTTIVWDPHEFGNVHGVDGVRWAAKAIENLPLRAILLAPSCVPSAPGLERGGADFDAAILADLLSWPEIGGIA
Template Known Secondary structure  TTT

TTT
SS


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Query Sequence  LYLT. YQYKLNDDEVLQALRRLHESGALTTVHPENDAAIASKRAEFIAAGLTAPRYHALSRPLECEAEAIARMINLAQIA
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Template Sequence  EIXNXRGVIERDPRXSGIVQAGLAAEKLVCGHARGLKN. . ADLNAFXAAGVSSDHELVS. . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 

TT
T


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   187..190.........200.........210.........220.... .....230.........240...
 
   231........240.........250.........260.........270.........280.........290.........300.........310
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Query Sequence  GNAPLYIVHLSNGLGLDYLRLARANHQPVWVETCPQYLLLDERSYDTEDGMKFILSPPLRNVREQDKLWCGISDGAIDVV
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Template Sequence  . . . . . . . . . . . . . . . GEDLXAKLRAGLTIELRGSHDHLL. . . . . . . . . . . . . . . . . . . . . . PEFVAALNTLGHLPQTVTL
Template Known Secondary structure  ...............T
SSSGGG......................TS

TT
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Query Sequence  ATDHCTFSMAQRLQISKGDFSRCPNGLPGVENRMQLLFSSGVMTGRITPERFVELTSAMPARLFGLWPQKGLLAPGSDGD
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Template Sequence  CTDDVFPDDLLQGG. . . . . . . . . . . . . . . . . . GLDDVVRRLVRY. GLKPEWALRAATLNAAQRLGRSDL. GLIAAGRRAD
Template Known Secondary structure 
B



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Query Sequence  VVIIDPRQSQQIQHRHLHDNADYSPWEGFTCQGAIVRTLSRGETIFCDGTFTGKAGR
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Template Sequence  IVVFEDLNGF. . . . . . . . . . . . . . . . . . . . . . . SARHVLASGRAVAEGGRXLVDIPT
Template Known Secondary structure  S
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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