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Job DescriptionQ46806
Confidence100.00%DateThu Jan 5 12:34:31 GMT 2012
Rank50Aligned Residues361
% Identity12%Templatec3egjA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:n-acetylglucosamine-6-phosphate deacetylase; PDBTitle: n-acetylglucosamine-6-phosphate deacetylase from vibrio cholerae.
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10....... ..20.........30.........40.........50.........60......... 70.........
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Query Sequence  VLIKNGTVVNADGQA. KQDLLIESGIVRQLGNNISPQLPYEEIDATGCYVFPGGVDVHTHFNIDVGIA. . RSCDDFFTGT
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Template Sequence  YALTNCKIYTGNDVLVKHAVIINGDKIEAVCPIESLPSEMNVVDLNGANLSPGFIDLQLNGCGGVMFNDEITAETIDTMH
Template Known Secondary structure  SS
SS
SSTTGGGS
TT


TT




TT

TTTS
S
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   80.........90.........100.........110.........120.........130.... .....140.......
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Query Sequence  RAAACGGTTTIIDHMGFGPNGCRLRHQLEVYRGYAAHKAVIDYSFHGVIQHINHA. . . . . . . . . . . . ILDEIPMIVEEGL
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Template Sequence  KANLKSGCTSFLPTLITS. SDENMRQAIAAAREYQAKYPNQSLGLHLEGPYLNVMKKGIHSVDFIRPSDDTMIDTICANS
Template Known Secondary structure  TTTS
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SSSSB
S
SS

GGG
TTS
TTT




TG
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   82.......90......... 100.........110.........120.........130.........140.........150.........160
 
   148.150.........160.........170.........180.........190.........200.........210.........220.......
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Query Sequence  SSFKLYLTYQYKLNDDEVLQALRRLHESGALTTVHPENDAAIASKRAEFIAAGLTAPRYHALSRPLECEAEAIARMINLA
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Template Sequence  DVIAKVTLAPENNKPEHIEKLVK. . . . . AGIVVSIGHTNATYSEARKSFESGITFATHLFNAMTPMVGREPGVVGAIYDT
Template Known Secondary structure  GG
GGGS
.....TT

SB


T

SSTTSSB


BTTB
T
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   161........170.........180... ......190.........200.........210.........220.........230.....
 
   228.230.........240.........250.........260.........270.........280.........290.........300.......
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Query Sequence  QIAGNAPLYIVHLSNGLGLDYLRLARANHQPVWVETCPQYLLLDERSYDTEDGMKFILSPPLRNVREQDKLWCGISDGAI
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Template Sequence  PEVYAGIIADGFHVDYANIRIAHKIKGEKLVLVTDATAPAGA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT


SSSSS
GGG


B
TTTTS......................................
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   236...240.........250.........260.........270.......
 
   308.310.........320.........330.........340.........350.........360.........370.........380.......
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Query Sequence  DVVATDHCTFSMAQRLQISKGDFSRCPNGLPGVENRMQLLFSSGVMTGRITPERFVELTSAMPARLFGLWPQKGLLAPGS
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Template Sequence  . . . . EMDYFIFVGKKVYYRDGKCVDENGTLGGSALTMIEAVQNTVEHVGIALDEALRMATLYPAKAIGVDEKLGRIKKGM
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STTTTTTT

B


TT


TTTT
TTTSSS

TTS
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   278.280.........290.........300.........310.........320.........330.........340.........350...
 
   388.390.........400.........410.........420.........430........
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Query Sequence  DGDVVIIDPRQSQQIQHRHLHDNADYSPWEGFTCQGAIVRTLSRGETIFCD
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Template Sequence  IANLTVFDRDF. . . . . . . . . . . . . . . . . . . . . . . . . NVKATVVNGQ. . YEQ
Template Known Secondary structure  B


TTS.........................
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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