Job Description Q46806 Confidence 100.00% Date Thu Jan 5 12:34:31 GMT 2012 Rank 15 Aligned Residues 419 % Identity 24% Template c3d6nA_ PDB info PDB header:hydrolase/transferase Chain: A: PDB Molecule:dihydroorotase; PDBTitle: crystal structure of aquifex dihydroorotase activated by aspartate2 transcarbamoylase Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.			.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		M	R	V	L	I	K	N	G	T	V	V	N	A	D	G	.	.	Q	A	K	Q	D	L	L	I	E	S	G	I	V	R	Q	L	G	N	N	I	S	P	Q	L	P	Y	E	E	I	D	A	T	G	C	Y	V	F	P	G	G	V	D	V	H	T	H	F	N	I	D	V	G	I	A	R	S	C	D	D	F	F	T	G
Query Conservation																	.	.
Alig confidence																	.	.																						.																																		.	.
Template Conservation																																								.																																		.	.
Template Sequence		L	K	L	I	V	K	N	G	Y	V	I	D	P	S	Q	N	L	E	G	E	F	D	I	L	V	E	N	G	K	I	K	K	I	D	K	N	I	L	.	V	P	E	A	E	I	I	D	A	K	G	L	I	V	C	P	G	F	I	D	I	H	V	H	L	R	D	P	G	Q	T	Y	K	.	.	E	D	I	E	S	G
Template Known Secondary structure								S						G	G	G	T				S							T	T							S	S			.		T	T							T	T	S															T	T	T		T	T	T	.	.
Template Predicted Secondary structure																																								.																																		.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	A	A	A	C	G	G	T	T	T	I	I	D	H	M	G	F	G	P	N	G	C	R	L	R	H	Q	L	E	V	Y	R	G	Y	A	A	H	K	A	V	I	D	Y	S	F	H	G	V	I	Q	H	I	N	H	A	I	L	D	E	I	P	M	I	V	E	E	G	L	S	S	F	K	L	Y	L	T	Y	Q	Y
Query Conservation
Alig confidence																																																																												.	.
Template Conservation																																																																												.	.
Template Sequence		S	R	C	A	V	A	G	G	F	T	T	I	V	C	M	P	N	T	N	P	P	I	D	N	T	T	V	V	N	Y	I	L	Q	K	S	K	S	V	G	L	C	R	V	L	P	T	G	T	I	T	K	G	R	K	G	K	E	I	A	D	F	Y	S	L	K	E	A	G	C	V	A	F	T	D	.	.	D	G	S	P
Template Known Secondary structure								T	T								S		S	S	S		S		S																S	S						B		S	B	G	G	G		S	S	S	B										T				B			.	.	T	T	S
Template Predicted Secondary structure																																																																												.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.			.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	N	D	D	E	V	L	Q	A	L	R	R	L	H	E	S	G	A	L	T	T	V	H	P	E	N	D	A	A	I	A	S	K	R	A	E	F	I	A	A	G	L	T	A	P	R	Y	H	A	L	S	R	P	L	E	C	E	A	E	A	I	A	R	M	I	N	L	A	Q	I	A	G	N	A	P	L	Y	I	V
Query Conservation
Alig confidence																																				.	.	.	.																																				.
Template Conservation																																				.	.	.	.																																				.
Template Sequence		V	M	D	S	S	V	M	R	K	A	L	E	L	A	S	Q	L	G	V	P	I	M	D	H	C	E	D	D	K	L	A	Y	G	V	.	.	.	.	I	N	E	G	E	V	S	A	L	L	G	L	S	S	R	A	P	E	A	E	E	I	Q	I	A	R	D	G	I	L	A	Q	R	T	G	.	G	H	V	H	I	Q
Template Known Secondary structure																		T	T										T	T	T	B		S	S	.	.	.	.			T	T																																.
Template Predicted Secondary structure																																				.	.	.	.																																				.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190					.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	S	N	G	L	G	L	D	Y	L	R	L	A	R	A	N	H	Q	P	V	W	V	E	T	C	P	Q	Y	L	L	L	D	E	R	S	Y	D	T	E	D	G	M	K	F	I	L	S	P	P	L	R	N	V	R	E	Q	D	K	L	W	C	G	I	S	D	G	A	I	D	V	V	A	T	D	H	C	T	F	S
Query Conservation
Alig confidence																																						.
Template Conservation																																						.
Template Sequence		H	V	S	T	K	L	S	L	E	I	I	E	F	F	K	E	K	G	V	K	I	T	C	E	V	N	P	N	H	L	L	F	T	E	R	E	.	V	L	N	S	G	A	N	A	R	V	N	P	P	L	R	K	K	E	D	R	L	A	L	I	E	G	V	K	R	G	I	I	D	C	F	A	T	D	H	A	P	H	Q
Template Known Secondary structure																	T	T	T																T	T		.					G	G	G	G			S	S																	T	T		S							B
Template Predicted Secondary structure																																						.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.		.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	Q	R	L	Q	I	S	K	G	D	F	S	R	C	P	N	G	L	P	G	V	E	N	R	M	Q	L	L	F	S	S	G	V	M	T	G	R	I	T	P	E	R	F	V	E	L	T	S	A	M	P	A	R	L	F	G	L	W	P	Q	K	G	L	L	A	P	G	S	D	G	D	V	V	I	I	D	P	R	Q
Query Conservation
Alig confidence																				.	.	.	.	.	.																																				.	.
Template Conservation																				.	.	.	.	.	.																																				.	.
Template Sequence		T	F	E	K	E	L	V	E	F	A	M	P	G	I	I	G	L	Q	.	.	.	.	.	.	T	A	L	P	S	A	L	E	L	Y	R	K	G	I	I	S	L	K	K	L	I	E	M	F	T	I	N	P	A	R	I	I	G	V	D	.	.	L	G	T	L	K	L	G	S	P	A	D	I	T	I	F	D	P	N	K
Template Known Secondary structure		G	G	G	S	S	S	G	G	G					B			T	T	.	.	.	.	.	.	T											T	T	S	S								T	T	T								T		S	.	.		S				T	T	S	B
Template Predicted Secondary structure																				.	.	.	.	.	.																																				.	.
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.							.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.			.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	Q	I	Q	H	R	H	L	H	D	N	A	D	Y	S	P	W	E	G	F	T	C	Q	G	A	I	V	R	T	L	S	R	G	E	T	I	F	C	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	W	I	L	N	E	E	T	N	L	S	K	S	R	N	T	P	L	W	G	K	V	L	K	G	K	V	I	Y	T	I	K	D	G	K	M	V	Y	K	D
Template Known Secondary structure						S	T	T	T			S	S					T	T	T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.