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Job DescriptionQ46806
Confidence100.00%DateThu Jan 5 12:34:31 GMT 2012
Rank41Aligned Residues355
% Identity19%Templatec3be7B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:zn-dependent arginine carboxypeptidase; PDBTitle: crystal structure of zn-dependent arginine carboxypeptidase
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10..... ....20.........30.........40.........50.........60.........70...
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Query Sequence  RVLIKNGTVVNADG. . QAKQDLLIESGIVRQLGNNISPQLPYEEIDATGCYVFPGGVDVHTHFNIDVGIARSCD. . . . . .
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Template Sequence  DFLIKSKGYLDIQTGEIIKADLLIRNGKIAEIGKI. . NTKDATVISIPDLILIPGLMDSHVHIVGNDSKGEESIADSSHM
Template Known Secondary structure 
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TTT



TTS
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SS

TT



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SGGGTT

TT
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   5....10.........20.........30......... 40.........50.........60.........70.........80..
 
   74.....80.........90.........100.........110.........120.........130 .
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Query Sequence  . . . DFFTGTRAAACGGTTTIIDHMGFGPNGCRLRHQLEVYRGYAAHKAVIDYSFHGVIQH. . . . . . . . . . . . . . . . . . . I
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Template Sequence  GTVWGVVNAEKTLMAGFTTVRNVGAANYADVSVRDAIERGVINGPTMLVSGPALGITGGHCDHNLLPPEFNYSSEGVVDS
Template Known Secondary structure  TT


STTTTSS





S
BB
TTSTTS


S
TTT



TTB

S
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   132.......140.........150..... ....160.........170.........180.........190.........200.
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Query Sequence  NHAILDEIPMIVEEGLSSFKLYLT. . . . . . . . . . YQYKLNDDEVLQALRRLHESGALTTVHPENDAAIASKRAEFIAAGL
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Template Sequence  PWEARKMVRKNRKYGADLIKFCATGGVMSRNTDVNAKQFTLEEMKAIVDEAHNHGMKVAAHAHGLIG. . . . . . . . . . . . .
Template Known Secondary structure  T
S
B

SSSSS

TTSB
S
TT

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   163......170.........180.........190.........200.........210.........220.........
 
   202.......210.........220.........230.........240.........250.........260.........270.........280.
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Query Sequence  TAPRYHALSRPLECEAEAIARMINLAQIAGNAPLYIVHLSNGLGLDYLRLARANHQPVWVETCPQYLLLDERSYDTEDGM
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . IKAAIKAGVDSVEHASFIDD. . . ETIDMAIKNNTVLSMDIFVSDYILGEGA. KAGIRE
Template Known Secondary structure  ......................T
S
TT

...T



STTT.T

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   230.........240......... 250.........260.........270....... ..280...
 
   282.......290.........300.........310.........320.........330.........340.........350.........360.
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Query Sequence  KFILSPPLRNVREQDKLWCGISDGAIDVVATDHCTFSMAQRLQISKGDFSRCPNGLPGVENRMQLLFSSGVMTGRITPER
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Template Sequence  ESLNKERLVGKKQRENFMNAHRRGAIITFGTDAGIFDHGDNAKQF. . . . . . . . . . . . . . . . . . . . . . . AYMVEWGMTPLE
Template Known Secondary structure  T





BTTB
TTGGGG.......................TT

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   284.....290.........300.........310.........320........ .330.........340
 
   362.......370.........380.........390.........400.........410.........420.........430........
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Query Sequence  FVELTSAMPARLFGLWPQKGLLAPGSDGDVVIIDPRQSQQIQHRHLHDNADYSPWEGFTCQGAIVRTLSRGETIFCD
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Template Sequence  AIQASTIKTATLFGI. ENIGQIKEGFDADIVGVIEN. . . . . . . . . . . . . . . . . PLANIRTLEEVAFVMKEGKVYKRR
Template Known Secondary structure  TTTT
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S
SS

TTSB

SS
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GGGTTS

TT

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   341........350..... ....360.........370..... ....380.........390.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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