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Job DescriptionQ46806
Confidence100.00%DateThu Jan 5 12:34:31 GMT 2012
Rank39Aligned Residues369
% Identity16%Templatec2vhlB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:n-acetylglucosamine-6-phosphate deacetylase; PDBTitle: the three-dimensional structure of the n-acetylglucosamine-2 6-phosphate deacetylase from bacillus subtilis
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10..... ....20.........30...... ...40.........50.........60...... ...70........
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Query Sequence  RVLIKNGTVVNADG. QAKQDLLIESGIVRQLGNNIS. PQLPYEEIDATGCYVFPGGVDVHTHFNIDV. GIARSCDDFFTG
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Template Sequence  SLLIKDIAIVTENEVIKNGYVGINDGKISTVSTERPKEPYSKEIQAPADSVLLPGMIDIHIHGGYGADTMDASFSTLDIM
Template Known Secondary structure 

SS
TTSS

SS

S

TT


TTGGG
S
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   7980.........90.........100.........110.........120.. .......130.........140.
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Query Sequence  TRAAACGGTTTIIDHMGFGPNGCRLRHQLEVYRGYAAHKAVIDY. . . . . . . . . . . . . . . . . SFHGVIQHINHAILDEIPM
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Template Sequence  SSRLPEEGTTSFLATTITQEHGNISQALVNAREWKAAEESSLLGAELLGIHLEGPFVSPKRAGAQPKEWIRPSDVELFKK
Template Known Secondary structure  GGGGT

S

TTSGGGSSS
SSS
GGG
TTS
GGG




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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   142.......150.........160.........170.........180.........190.........200.........210.........220.
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Query Sequence  IVEEGLSSFKLYLTYQYKLNDDEVLQALRRLHESGALTTVHPENDAAIASKRAEFIAAGLTAPRYHALSRPLECEAEAIA
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Template Sequence  WQQEAGGLIKIV. . . TLAPEEDQHFELIRHLKDESIIASMG. HTDADSALLSDAAKAGASHMTHLYNAMSPFHHREPGVI
Template Known Secondary structure  TTT
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GGGSGGGTT

.SB


TTSSTTTTB



SSS
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   164.....170..... ....180.........190.........200. ........210.........220.........230.........
 
   222.......230.........240.........250.........260.........270.........280.........290.........300.
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Query Sequence  RMINLAQIAGNAPLYIVHLSNGLGLDYLRLARANHQPVWVETCPQYLLLDERSYDTEDGMKFILSPPLRNVREQDKLWCG
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Template Sequence  GTALAHDGFVTELIADGIHSHPLAAKLAFLAKGSSKLILITDSMRAKGLKDGVYEFGGQSVTV. . . . . . . . . . . . . . . . .
Template Known Secondary structure 
TT

SSSSS

TTS

B
TTTTS
STT.................
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   240.........250.........260.........270.........280.........290.........300..
 
   302.......310.........320.........330.........340.........350.........360.........370.........380.
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Query Sequence  ISDGAIDVVATDHCTFSMAQRLQISKGDFSRCPNGLPGVENRMQLLFSSGVMTGRITPERFVELTSAMPARLFGLWPQKG
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Template Sequence  . . RGRTALLSDGTL. . . . . . . . . . . . . . . . . . . . . . AGSILKMNEGARHMREFTNCSWTDIANITSENAAKQLGIFDRKG
Template Known Secondary structure  ..TT
TT

B......................
SB





TTT
TTTSS
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   303......310.... .....320.........330.........340.........350........
 
   382.......390.........400.........410.........420.........430.........440
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Query Sequence  LLAPGSDGDVVIIDPRQSQQIQHRHLHDNADYSPWEGFTCQGAIVRTLSRGETIFCDGT
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Template Sequence  SVTVGKDADLVIVSSDC. . . . . . . . . . . . . . . . . . . . . . . . . EVILTICRGNIAFISKE
Template Known Secondary structure  S

TTSB


TT
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TT
SS
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   359360.........370..... ....380.........390..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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