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Job DescriptionQ46806
Confidence100.00%DateThu Jan 5 12:34:31 GMT 2012
Rank36Aligned Residues340
% Identity19%Templatec2q09A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:imidazolonepropionase; PDBTitle: crystal structure of imidazolonepropionase from environmental sample2 with bound inhibitor 3-(2,5-dioxo-imidazolidin-4-yl)-propionic acid
Resolution1.97 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10..... ....20.........30.........40.........50.........60.........70...
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Query Sequence  RVLIKNGTVVNADG. . . . . . . QAKQDLLIESGIVRQLGNNISPQLPYEEIDATGCYVFPGGVDVHTHFNIDVGIARSCD.
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Template Sequence  ERVWLNVTPATLRSDLADYGLLEPHALGVHEGRIHALVPXQDLKYPAHWQDXKGKLVTPGLIDCHTHLIFAGSRAEEFEL
Template Known Secondary structure  SB


TTSSTT
B
SSTTGGG



TTS
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   6...10.........20.........30.........40.........50.........60.........70.........80.....
 
   74.....80.........90.........100.........110.........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DFFTGTRAAACGGTTTIIDHMGFGPNGCRLRHQLEVYRGYAAHKAV
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Template Conservation                 
                              
 
                               
Template Sequence  RQKGVPYAEIARKGGGIISTVRATRAASEDQLFELALPRVKSLIREGVTTVEIKSGYGLTLEDELKXLRVARRLGEALPI
Template Known Secondary structure  TT

TT
TS
T

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   88.90.........100.........110.........120.........130.........140.........150.........160.......
 
   120.........130...... ...140.........150.........160.........170.........180.......
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Query Sequence  IDYSFHGVIQHINHAIL. . . . . . . . . . . . DEIPMIVEEGLSSFKLYLTYQYKLNDDEVLQALRRLHESGALTTVHPENDA
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Template Conservation                                                                  
   
     
     
Template Sequence  RVKTTLLAAHAVPPEYRDDPDSWVETICQEIIPAAAEAGLADAVDVFCEHIGFSLAQTEQVYLAADQYGLAVKGHXDQLS
Template Known Secondary structure  TS

GGGTT
TTT

SBBSTTSB
TT
SSS
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   168.170.........180.........190.........200.........210.........220.........230.........240.......
 
   188.190.........200.........210.........220.........230.........240.........250.........260.......
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Query Sequence  AIASKRAEFIAAGLTAPRYHALSRPLECEAEAIARMINLAQIAGNAPLYIVHLSNGLGLDYLRLARANHQPVWVETCPQY
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Template Conservation              .............................................................       
Template Sequence  NLGGSTLAANFG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ALSVDHL
Template Known Secondary structure 

STT.............................................................
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   248.250......... 260......
 
   268.270....... ..280........ .290.........300.........310.........320.........330.........340..
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Query Sequence  LLLDERSYDT. . EDGMKFILSPP. . . LRNVREQDKLWCGISDGAIDVVATDHCTFSMAQRLQISKGDFSRCPNGLPGVEN
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Template Sequence  EYLDPEGIQALAHRGVVATLLPTAFYFLKETKLPPVVALRKAGVPXAVSSDINPGTAP. . . . . . . . . . . . . . . . . . . . IV
Template Known Secondary structure  TT

T

TT





TT





BTTTB
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   267..270.........280.........290.........300.........310.........320.... ..
 
   343......350.........360.........370.........380.........390.........400.........410.........420..
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Query Sequence  RMQLLFSSGVMTGRITPERFVELTSAMPARLFGLWPQKGLLAPGSDGDVVIIDPRQSQQIQHRHLHDNADYSPWEGFTCQ
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Template Sequence  SLRXAXNXACTLFGLTPVEAXAGVTRHAARALGEQEQLGQLRVGXLADFLVWNCGHPAELSYLIGVDQ. . . . . . . . . . . .
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TTTT
TTTSSS

TTSB

SSS
TTS
S


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   327..330.........340.........350.........360.........370.........380.........390....
 
   423......430......
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Query Sequence  GAIVRTLSRGETIF
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Template Sequence  . . LVSRVVNGEETL
Template Known Secondary structure  ..TT

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   395....400......
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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