Job Description Q46806 Confidence 100.00% Date Thu Jan 5 12:34:31 GMT 2012 Rank 23 Aligned Residues 363 % Identity 16% Template c2pajA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative cytosine/guanine deaminase; PDBTitle: crystal structure of an amidohydrolase from an environmental sample of2 sargasso sea Resolution 2.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.										.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.
Query Sequence		R	V	L	I	K	N	G	T	V	V	N	A	D	G	.	.	.	.	.	.	.	.	.	Q	A	K	Q	D	L	L	I	E	S	G	I	V	R	Q	L	G	N	N	I	S	P	Q	L	P	Y	E	E	I	D	A	T	G	C	Y	V	F	P	G	G	V	D	V	H	T	H	F	N	I	D	V	G	I	A	R	S	C
Query Conservation																.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.																								.
Template Conservation																																																.
Template Sequence		S	T	L	I	R	N	A	A	A	I	M	T	G	G	R	G	T	A	D	D	P	S	R	V	P	G	P	D	I	R	I	V	G	D	T	I	D	A	I	G	A	L	A	P	R	P	.	G	E	T	I	V	D	A	T	D	C	V	I	Y	P	A	W	V	N	T	H	H	H	L	F	Q	S	L	L	K	G	E	P	F
Template Known Secondary structure								B	S			B					S	S	S	S	S		S	B										T	T						S	S					T	.	T							B	T														G	G	G	G	G			S
Template Predicted Secondary structure																																																.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		73											.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.															.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	.	.	.	.	.	.	.	.	.	.	D	F	F	T	G	T	R	A	A	A	C	G	G	T	T	T	I	I	D	H	M	G	F	G	P	N	G	C	R	L	R	H	Q	L	E	V	Y	R	G	Y	A	A	H	K	A	V	I	D	Y	S	F	H	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I
Query Conservation			.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	A	L	F	D	E	R	R	F	R	L	A	A	R	I	G	L	I	E	L	A	R	S	G	C	A	T	V	A	D	H	N	Y	V	Y	Y	P	G	M	P	F	D	S	S	A	I	L	F	E	E	A	E	K	L	G	L	R	F	V	L	L	R	G	G	A	T	Q	T	R	Q	L	E	A	D	L	P	T	A	L	R
Template Known Secondary structure		G	G	G																			T	T	T													T	T		S	S													T	T											S				S		S	T	T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.									150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																							.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.
Query Sequence		Q	H	I	N	H	A	I	L	D	E	I	P	M	I	V	E	E	G	L	S	S	.	.	.	.	.	.	.	.	F	K	L	Y	L	T	Y	Q	Y	K	L	N	D	D	E	V	L	Q	A	L	R	R	L	H	E	S	G	A	L	T	T	V	H	P	E	N	D	A	A	I	A	S	K	R	A	E	F	I	A	A	G
Query Conservation																							.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	E	T	L	D	A	Y	V	A	D	I	E	R	L	A	A	R	Y	H	D	A	S	P	R	A	M	R	R	V	V	M	A	P	T	T	V	L	Y	S	I	S	P	R	E	M	R	E	T	A	A	V	A	R	R	L	G	L	R	M	H	S	H	L	S	G	K	S	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																			T				S	T	T		S								T	T	T	T	T	S	S															T	T												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.			.
Predicted Secondary structure																																																																															.	.
Query SS confidence																																																																															.	.
Query Sequence		L	T	A	P	R	Y	H	A	L	S	R	P	L	E	C	E	A	E	A	I	A	R	M	I	N	L	A	Q	I	A	G	N	A	P	L	Y	I	V	H	L	S	N	G	L	G	L	D	Y	L	R	L	A	R	A	N	H	Q	P	V	W	V	E	T	C	P	Q	Y	L	L	L	D	E	R	S	Y	D	T	.	.	E
Query Conservation																																																																															.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	A	F	C	G	E	H	D	W	L	G	S	D	V	W	Y	A	H	L	V	K	V	D	A	D	E	I	A	L	L	A	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T			S	T	T					S			S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																	267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	M	K	F	I	L	S	P	P	L	R	N	V	R	E	Q	D	K	L	W	C	G	I	S	D	G	A	I	D	V	V	A	T	D	H	C	T	F	S	M	A	Q	R	L	Q	I	S	K	G	D	F	S	R	C	P	N	G	L	P	G	V	E	N	R	M	Q	L	L	F	S	S	G	V	M	T	G	R	I	T
Query Conservation
Alig confidence												.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	G	T	G	V	A	H	C	P	Q	.	.	.	S	N	G	R	L	P	V	R	E	M	A	D	A	G	V	P	V	S	I	G	V	D	G	A	A	S	N	E	A	A	D	M	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	V	H	M	T	W	L	A	Q	R	A	R	L	A	S
Template Known Secondary structure			T									.	.	.								T	T					T														S			S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T
Template Predicted Secondary structure												.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		300	.	.	.	.	.	.	.	.	.				310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.																			.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	R	F	V	E	L	T	S	A	M	P	A	R	L	F	G	L	W	P	Q	K	G	L	L	A	P	G	S	D	G	D	V	V	I	I	D	P	R	Q	S	Q	Q	I	Q	H	R	H	L	H	D	N	A	D	Y	S	P	W	E	G	F	T	C	Q	G	A	I	V	R	T	L	S	R	G	E	T	I	F	C	D
Query Conservation
Alig confidence																				.																																										.	.	.	.	.
Template Conservation																				.																																										.	.	.	.	.
Template Sequence		I	A	E	V	I	H	W	G	T	A	G	G	A	R	V	M	G	L	.	D	E	V	G	K	V	A	V	G	Y	A	A	D	I	A	V	Y	R	L	D	D	P	R	Y	F	G	L	H	D	P	A	I	G	P	V	A	S	G	G	R	P	.	.	.	.	.	S	V	M	A	L	F	S	A	G	K	R	V	V	V	D
Template Known Secondary structure										T								T		.	T	T	S	S			S	T	T	S	B										S	G	G	G	T	T		S	S	G	G	G					S		S			.	.	.	.	.								T	T						T
Template Predicted Secondary structure																				.																																										.	.	.	.	.
Template SS confidence
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400		.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.						.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
		439	440	.	.	.	.	.	.	.	.	.	450	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	F	T	G	K	A	G	R	G	R	F	L	R	R
Query Conservation
Alig confidence										.
Template Conservation										.
Template Sequence		D	L	I	E	G	V	D	I	.	K	E	L	G	G	E
Template Known Secondary structure		T	B		T	T				.
Template Predicted Secondary structure										.
Template SS confidence
		457	.	.	460	.	.	.	.		.	.	.	.	.	470