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Job DescriptionQ46806
Confidence100.00%DateThu Jan 5 12:34:31 GMT 2012
Rank53Aligned Residues356
% Identity16%Templatec2icsA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:adenine deaminase; PDBTitle: crystal structure of an adenine deaminase
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MRVLIKNGTVVNADGQAKQDLLIESGIVRQLGNNISPQLPYEEIDATGCYVFPGGVDVHTHFNIDVGIARSCDDFFTGTR
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Template Sequence  YDLLIKNGQTVNG. . . XPVEIAIKEKKIAAVAATISGSAKETIHLEPGTYVSAGWIDDHVHCFEKXALYYDY. . . . . PDE
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TTS...
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TT




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   5....10....... ..20.........30.........40.........50.........60.........70... ...
 
   81........90.........100.........110.........120.........130..... ....140.........150....
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Query Sequence  AAACGGTTTIIDHMGFGPNGCRLRHQLEVYRGYAAHKAVIDYSFHGVIQHINHAI. . . . LDEIPMIVEEGLSSFKLYL. .
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Template Sequence  IGVKKGVTTVIDAGTTGAENIHEFYDLAQQAKTNVFGLVNISKWGIVAQDELADLSKVQASLVKKAIQELPDFVVGIARX
Template Known Secondary structure  TGGGTSSS
TTTTSSS

SSTTTTSSS
TTSSGGG


TTT

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   77..80.........90.........100.........110.........120.........130.........140.........150......
 
   155....160.........170.........180.........190.........200.........210.........220.........230.
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Query Sequence  . . . TYQYKLNDDEVLQALRRLHESGALTTVHPENDAAIASKRAEFIAAGLTAPRYHALSRPLECEAEAIARMINLAQIAG
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Template Sequence  SRTVIGDNGITPLELAKQIQQENQEIPLXVHIGSAPPHLDEILALXEKGDVLTHCFNGKENG. . . . . . . . . . . . . . . . . .
Template Known Secondary structure  STT
TTTTTT



SSSS


TT
STT

STTS..................
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   158.160.........170.........180.........190.........200.........210.........
 
   232.......240.........250.........260.........270.........280.........290.........300..... ....310
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Query Sequence  NAPLYIVHLSNGLGLDYLRLARANHQPVWVETCPQYLLLDERSYDTEDGMKFILSPPLRNVREQDKLWCGISDG. AIDVV
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ILDQATDKIKDFAWQAYNKGVVFDIGHGTDSFNFHVAETALREGXKAASI
Template Known Secondary structure  ..............................STTTT
TT



TTTS

TT


SB
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   220.........230.........240.........250.........260.........
 
   311........320.........330.........340.........350.........360.........370.........380.........390
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Query Sequence  ATDHCTFSMAQRLQISKGDFSRCPNGLPGVENRMQLLFSSGVMTGRITPERFVELTSAMPARLFGLWPQKGLLAPGSDGD
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Template Sequence  STDIYIRNRE. . . . . . . . . . . . . . . . . NGPVYDLATTXEKLRVVG. YDWPEIIEKVTKAPAENFHLTQK. GTLEIGKDAD
Template Known Secondary structure 


B
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T.

TTTTT
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   270......... 280.........290....... ..300.........310.........320 .........330
 
   391........400.........410.........420.........430........
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Query Sequence  VVIIDPRQSQQIQHRHLHDNADYSPWEGFTCQGAIVRTLSRGETIFCD
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Template Sequence  LTIFTIQAEEKTLTDSNGLTRVAKEQI. . . . . . RPIKTIIGGQ. IYDN
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TTS
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   331........340.........350....... ..360....... ..370.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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