Phyre 2 alignment of Q46806 with c2gzxB

Job Description Q46806
Confidence 97.27% Date Thu Jan 5 12:34:31 GMT 2012

Rank 138 Aligned Residues 245

% Identity 13% Template c2gzxB_

PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative tatd related dnase; PDBTitle: crystal structure of the tatd deoxyribonuclease mw0446 from2 staphylococcus aureus. northeast structural genomics consortium3 target zr237.

Resolution 2.20 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	G	V	D	V	H	T	H	F	N	I	D	V	G	I	A	R	S	C	D	D	F	F	T	G	T	R	A	A	A	C	G	G	T	T	T	I	I	D	H	M	G	F	G	P	N	G	C	R	L	R	H	Q	L	E	V	Y	R	G	Y	A	A	H	K	A	V	I	D	Y	S	F	H	G	V	I	Q	H	I	N	H	A
Query Conservation
Alig confidence									.	.	.	.																															.	.	.	.
Template Conservation									.	.	.	.																															.	.	.	.
Template Sequence	L	I	D	T	H	V	H	L	.	.	.	.	N	D	E	Q	Y	D	D	D	L	S	E	V	I	T	R	A	R	E	A	G	V	D	R	X	F	V	V	G	F	N	.	.	.	.	K	S	T	I	E	R	A	X	K	L	I	D	E	Y	D	F	L	Y	G	I	I	G	W	H	P	V	D	A	I	D	F	T	E	E
Template Known Secondary structure								T	.	.	.	.	T	S	G	G	G	T	T	T											T	T										S	.	.	.	.															T	T									G	G	G	G	G	G
Template Predicted Secondary structure									.	.	.	.																															.	.	.	.
Template SS confidence
	2	.	.	.	.	.	.	.					10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.					40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.

	135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.								.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.
Query Sequence	I	L	D	E	I	P	M	I	V	E	E	G	L	S	S	F	K	L	Y	L	T	.	.	.	.	.	.	.	Y	Q	Y	K	L	N	D	D	E	V	L	Q	A	L	R	R	L	H	E	S	G	A	L	T	T	V	H	P	E	N	D	A	A	I	A	S	K	R	A	E	F	I	A	A	G	L	T	A	P	R	Y	H
Query Conservation																						.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	H	L	E	W	I	E	S	L	A	Q	H	P	K	V	I	G	I	G	E	X	G	L	D	Y	H	W	D	K	S	P	A	D	V	Q	K	E	V	F	R	K	Q	I	A	L	A	K	R	L	K	L	P	I	I	I	H	N	R	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									T	T	S	T	T												S			S	S																				T									S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.

	208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence	A	L	S	R	P	L	E	C	E	A	E	A	I	A	R	M	I	N	L	A	Q	I	A	G	N	A	P	L	Y	I	V	H	L	S	N	G	L	G	L	D	Y	L	R	L	A	R	A	N	H	Q	P	V	W	V	E	T	C	P	Q	Y	L	L	L	D	E	.	R	S	Y	D	T	E	D	G	M	K	F	I	L	S
Query Conservation																																																																		.
Alig confidence	.	.	.	.	.	.	.	.	.	.																																																								.											.	.	.	.
Template Conservation	.	.	.	.	.	.	.	.	.	.																																																																			.	.	.	.
Template Sequence	.	.	.	.	.	.	.	.	.	.	A	T	Q	D	C	I	D	I	L	L	E	E	H	A	E	E	V	G	G	I	X	H	S	F	S	G	S	P	E	I	A	D	I	V	T	N	K	L	N	F	Y	I	S	L	G	G	P	V	T	F	K	N	A	K	Q	P	K	E	V	A	K	H	V	S	X	E	.	.	.	.
Template Known Secondary structure	.	.	.	.	.	.	.	.	.	.												T	T	G	G	G	T					T	T			S											T	S								G	G	G	G		S	S											S		G	G	.	.	.	.
Template Predicted Secondary structure	.	.	.	.	.	.	.	.	.	.																																																																			.	.	.	.
Template SS confidence
											132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.

	287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	P	P	L	R	N	V	R	E	Q	D	K	L	W	C	G	I	S	D	G	A	I	D	V	V	A	T	D	H	C	T	F	S	M	A	Q	R	L	Q	I	S	K	G	D	F	S	R	C	P	N	G	L	P	G	V	E	N	R	M	Q	L	L	F	S	S	G	V	M	T	G	R	I	T	P	E	R	F	V	E	L	T
Query Conservation
Alig confidence	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	L	V	E	T	D	A	P	Y	L	S	P	H	P	Y	R	G	K	R	N	E	P	A	R	.	.	.	.	.	.	.	.	.	.	.	.	V	T	L	V	A	E	Q	I	A	E	L	K	G	L	S	Y	E	E	V	C	E	Q	T
Template Known Secondary structure	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G						B	T	T	B				T	T	S	T	T	S				G	G	G	.	.	.	.	.	.	.	.	.	.	.	.													T
Template Predicted Secondary structure	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																					198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.													.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.

	367	.	.	370	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	S	A	M	P	A	R	L	F	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence	T	K	N	A	E	K	L	F	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
	246	.	.	.	250	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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