Job Description Q46806 Confidence 100.00% Date Thu Jan 5 12:34:31 GMT 2012 Rank 1 Aligned Residues 457 % Identity 33% Template c2gseC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:dihydropyrimidinase-related protein 2; PDBTitle: crystal structure of human dihydropyrimidinease-like 2 Resolution 2.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	L	I	K	N	G	T	V	V	N	A	D	G	Q	A	K	Q	D	L	L	I	E	S	G	I	V	R	Q	L	G	N	N	I	S	P	Q	L	P	Y	E	E	I	D	A	T	G	C	Y	V	F	P	G	G	V	D	V	H	T	H	F	N	I	D	V	G	I	A	R	S	C	D	D	F	F	T	G	T	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	L	I	K	G	G	K	I	V	N	D	D	Q	S	F	Y	A	D	I	Y	M	E	D	G	L	I	K	Q	I	G	E	N	L	I	V	P	G	G	V	K	T	I	E	A	H	S	R	M	V	I	P	G	G	I	D	V	H	T	R	F	Q	M	P	D	Q	G	M	T	S	A	D	D	F	F	Q	G	T	K	A
Template Known Secondary structure													S	S											T	T							S	S					S	S							T	T														T	T				T	T				S	S
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.			.	.	.	.	.	.
Predicted Secondary structure																																																																										.	.
Query SS confidence																																																																										.	.
Query Sequence		A	A	C	G	G	T	T	T	I	I	D	H	M	G	F	G	P	N	G	C	R	L	R	H	Q	L	E	V	Y	R	G	Y	A	A	H	K	A	V	I	D	Y	S	F	H	G	V	I	Q	H	I	N	H	A	I	L	D	E	I	P	M	I	V	E	E	G	L	S	S	F	K	L	Y	.	.	L	T	Y	Q	Y	K
Query Conservation																																																																										.	.
Alig confidence																																																																										.	.
Template Conservation
Template Sequence		A	L	A	G	G	T	T	M	I	I	D	H	V	V	P	E	P	G	T	S	L	L	A	A	F	D	Q	W	R	E	W	A	D	S	K	S	C	C	D	Y	S	L	H	V	D	I	S	E	W	H	K	G	I	Q	E	E	M	E	A	L	V	K	D	H	G	V	N	S	F	L	V	Y	M	A	F	K	D	R	F	Q
Template Known Secondary structure						T												T	T	S																		S	S									S				T	T												S									S	S	S	T	T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	D	D	E	V	L	Q	A	L	R	R	L	H	E	S	G	A	L	T	T	V	H	P	E	N	D	A	A	I	A	S	K	R	A	E	F	I	A	A	G	L	T	A	P	R	Y	H	A	L	S	R	P	L	E	C	E	A	E	A	I	A	R	M	I	N	L	A	Q	I	A	G	N	A	P	L	Y	I	V	H
Query Conservation
Alig confidence																																																																										.
Template Conservation																																																																										.
Template Sequence		L	T	D	C	Q	I	Y	E	V	L	S	V	I	R	D	I	G	A	I	A	Q	V	H	A	E	N	G	D	I	I	A	E	E	Q	Q	R	I	L	D	L	G	I	T	G	P	E	G	H	V	L	S	R	P	E	E	V	E	A	E	A	V	N	R	A	I	T	I	A	N	Q	T	N	.	C	P	L	Y	I	T	K
Template Known Secondary structure																	T	T								S															T	T			S	T							S																				T	.
Template Predicted Secondary structure																																																																										.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.				.	.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure																																								.	.	.												.
Query SS confidence																																								.	.	.												.
Query Sequence		L	S	N	G	L	G	L	D	Y	L	R	L	A	R	A	N	H	Q	P	V	W	V	E	T	C	P	Q	Y	L	L	L	D	E	R	S	Y	D	T	.	.	.	E	D	G	M	K	F	I	L	S	P	P	.	L	R	N	V	R	E	Q	D	K	L	W	C	G	I	S	D	G	A	I	D	V	V	A	T	D	H	C
Query Conservation																																								.	.	.												.
Alig confidence																																								.	.	.												.
Template Conservation
Template Sequence		V	M	S	K	S	S	A	E	V	I	A	Q	A	R	K	K	G	T	V	V	Y	G	E	P	I	T	A	S	L	G	T	D	G	S	H	Y	W	S	K	N	W	A	K	A	A	A	F	V	T	S	P	P	L	S	P	D	P	T	T	P	D	F	L	N	S	L	L	S	C	G	D	L	Q	V	T	G	S	A	H	C
Template Known Secondary structure				S													T	T								B								G	G	G	G	G		S								T			S	S				S		T	T												T	S	S				B			B
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	S	M	A	Q	R	L	Q	I	S	K	G	D	F	S	R	C	P	N	G	L	P	G	V	E	N	R	M	Q	L	L	F	S	S	G	V	M	T	G	R	I	T	P	E	R	F	V	E	L	T	S	A	M	P	A	R	L	F	G	L	W	P	Q	K	G	L	L	A	P	G	S	D	G	D	V	V	I	I	D
Query Conservation
Alig confidence												.
Template Conservation												.
Template Sequence		T	F	N	T	A	Q	K	A	V	G	.	K	D	N	F	T	L	I	P	E	G	T	N	G	T	E	E	R	M	S	V	I	W	D	K	A	V	V	T	G	K	M	D	E	N	Q	F	V	A	V	T	S	T	N	A	A	K	V	F	N	L	Y	P	R	K	G	R	I	A	V	G	S	D	A	D	L	V	I	W	D
Template Known Secondary structure									G	G	G	.	T	T		G	G	G	S				B			T	T	T										T	T	T	S	S	S										T								T		T	T	T	S	S			S	T	T	S	B
Template Predicted Secondary structure												.
Template SS confidence
		335	.	.	.	.	340	.	.	.	.		.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	Q	S	Q	Q	I	Q	H	R	H	L	H	D	N	A	D	Y	S	P	W	E	G	F	T	C	Q	G	A	I	V	R	T	L	S	R	G	E	T	I	F	C	D	G	T	F	T	G	K	A	G	R	G	R	F	L	R	R	K	P	F	V	P	P	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	D	S	V	K	T	I	S	A	K	T	H	N	S	S	L	E	Y	N	I	F	E	G	M	E	C	R	G	S	P	L	V	V	I	S	Q	G	K	I	V	L	E	D	G	T	L	H	V	T	E	G	S	G	R	Y	I	P	R	K	P	F	P	D	F	V
Template Known Secondary structure										T	T	T	S	S	S	S		S			T	T	T	T													T	T						T	T						T	T				B					S	S
Template Predicted Secondary structure
Template SS confidence
		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.