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Job DescriptionQ46806
Confidence100.00%DateThu Jan 5 12:34:31 GMT 2012
Rank37Aligned Residues339
% Identity20%Templatec2gokA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:imidazolonepropionase; PDBTitle: crystal structure of the imidazolonepropionase from agrobacterium2 tumefaciens at 1.87 a resolution
Resolution1.87 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10..... ....20.........30....... ..40.........50.........60.........70
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Query Sequence  RVLIKNGTVVNADG. . . . . . . QAKQDLLIESGIVRQLGNNISP. . . . QLPYEEIDATGCYVFPGGVDVHTHFNIDVGIAR
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Template Sequence  TALWRNAQLATLNPAMDGIGAVENAVIAVRNGRIAFAGPESDLPDDLSTADETTDCGGRWITPALIDCHTHLVFGGNRAM
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TTSSTT
TTTTS

GGGS

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   18.20.........30.........40.........50.........60.........70.........80.........90.......
 
   71.. ......80.........90.........100.........110.....
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Query Sequence  SCD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DFFTGTRAAACGGTTTIIDHMGFGPNGCRLRHQLEVYRGYAA
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Template Conservation                     
                              
                             
Template Sequence  EFEMRLNGATYEEIAKAGGGIVSSVRDTRALSDEVLVAQALPRLDTLLSEGVSTIEIKSGYGLDIETELKMLRVARRLET
Template Known Secondary structure  TT

TT
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TTT

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   98.100.........110.........120.........130.........140.........150.........160.........170.......
 
   116...120.........130... ......140.........150.........160.........170.........180...
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Query Sequence  HKAVIDYSFHGVIQHINH. . . . . . . . . . . . AILDEIPMIVEEGLSSFKLYLTYQYKLNDDEVLQALRRLHESGALTTVHP
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Template Sequence  LRPVRIVTSYLAAHATPADYKGRNADYITDVVLPGLEKAHAEGLADAVDGFCEGIAFSVKEIDRVFAAAQQRGLPVKLHA
Template Known Secondary structure  TSS


TT


GGGTT
TTT

S

STTSB
TT

B
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   178.180.........190.........200.........210.........220.........230.........240.........250.......
 
   184.....190.........200.........210.........220.........230.........240.........250.........260...
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Query Sequence  ENDAAIASKRAEFIAAGLTAPRYHALSRPLECEAEAIARMINLAQIAGNAPLYIVHLSNGLGLDYLRLARANHQPVWVET
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Template Conservation                 .............................................................    
Template Sequence  EQLSNLGGAELAASY. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NALS
Template Known Secondary structure  SSSS
SST.............................................................T
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   258.260.........270.. ....
 
   264.....270....... ..280........ .290.........300.........310.........320.........330........
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Query Sequence  CPQYLLLDERSYDT. . EDGMKFILSPP. . . LRNVREQDKLWCGISDGAIDVVATDHCTFSMAQRLQISKGDFSRCPNGLP
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Template Sequence  ADHLEYLDETGAKALAKAGTVAVLLPGAFYALREKQLPPVQALRDAGAEIALATDCNPGTSP. . . . . . . . . . . . . . . . . .
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TT

T

TT





T





BTTTB
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   277..280.........290.........300.........310.........320.........330........
 
   339340.........350.........360.........370.........380.........390.........400.........410........
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Query Sequence  GVENRMQLLFSSGVMTGRITPERFVELTSAMPARLFGLWPQKGLLAPGSDGDVVIIDPRQSQQIQHRHLHDNADYSPWEG
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Template Sequence  . . LTSLLLTMNMGATLFRMTVEECLTATTRNAAKALGLLAETGTLEAGKSADFAIWDIERPAELVYRIGFNP. . . . . . . .
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TTTT
TTTSSS

TTSB



SSTT
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   339340.........350.........360.........370.........380.........390.........400........
 
   419420.........430.....
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Query Sequence  FTCQGAIVRTLSRGETI
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Template Sequence  . . . . . . LHARIFKGQKV
Template Known Secondary structure  ......TT
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   409410.........
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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