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Job DescriptionQ46806
Confidence99.97%DateThu Jan 5 12:34:31 GMT 2012
Rank55Aligned Residues352
% Identity18%Templatec1o12B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:n-acetylglucosamine-6-phosphate deacetylase; PDBTitle: crystal structure of n-acetylglucosamine-6-phosphate2 deacetylase (tm0814) from thermotoga maritima at 2.5 a3 resolution
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10... ......20.........30.........40.........50.........60.........70.........80..
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Query Sequence  LIKNGTVVNA. DGQAKQDLLIESGIVRQLGNNISPQLPYEEIDATGCYVFPGGVDVHTHFNIDVGIARSCDDFFTGTRAA
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Template Sequence  IVEKVLIVDPIDGEFTGDVEIEEGKIVKVEKR. . . . . . . . . ECIPRGVLXPGFVDPHIHGVV. . GADTXNCDFSEXEEFL
Template Known Secondary structure  TTTTT
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S

SS

T..TTTTT
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   2.......10.........20.........30... ......40.........50.... .....60.........70
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  ACGGTTTIIDHMGFGPNGCRLRHQLEVYRGYAAHKAVIDYSFHGVIQHINHAILDEIPMIVEEGLSSFKLYLTYQYKLND
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Template Sequence  YSQGVTTFLATTVSTSLEKXKEILRKARDYILENPSTSLLGVHLEGPYI. . . . . . . . . . . . . . . . . . . . SKEKKGAHSEK
Template Known Secondary structure  TTT

S

STT
S
SSS....................
STT
TTS
TT
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   71........80.........90.........100.........110......... 120.........130
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
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Query Sequence  DEVLQALRRLHESGALTTVHPENDAAIASKRAEFIAAGLTAPRYHALSRPLECEAEAIARMINLAQIAGNAPLYIVHLSN
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Template Sequence  HIRPPSERELSEIDSPAKXLTFAPEIESSELLLRLVKRDIVLSAGHSIATFEEFXKFYKEGVKRITHFPNGLKPLHHREI
Template Known Secondary structure  T




T

TT
TTSTTGGGGGGGGGGT

SB


TT

SSTTTTB



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   131........140.........150.........160.........170.........180.........190.........200.........210
 
   243......250.........260.........270.........280.........290.........300.........310.........320..
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Query Sequence  GLGLDYLRLARANHQPVWVETCPQYLLLDERSYDTEDGMKFILSPPLRNVREQDKLWCGISDGAIDVVATDHCTFSMAQR
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Template Sequence  G. . . . . ITGAGLLLDDVKLELICDGVHLSREXVKL. . . . . . . . . . . . . . . . . . . . . VYKVKKANGIVLVTDSISAAGLKD
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TT

SSSSS
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B
TTTTS
S
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   211 ........220.........230.........240 .........250.........260....
 
   323......330.........340.........350.........360.........370.........380.........390...
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Query Sequence  . . . . . . . . . LQISKGDFSRCPNGLPGVENRMQLLFSSGVMTGRITPERFVELTSAMPARLFGLWPQKGLLAPGSDGDVVI
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Template Sequence  GTTTLGDLVVKVKDGVPRLEDGTLAGSTLFFSQAVKNFRKFTGCSITELAKVSSYNSCVELGLDDR. GRIAEGTRADLVL
Template Known Secondary structure  TTTT
TTS
B

B





TT
TTS.S

STTSB

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   265....270.........280.........290.........300.........310.........320.........330 .........340...
 
   394.....400.........410.........420.........430........
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Query Sequence  IDPRQSQQIQHRHLHDNADYSPWEGFTCQGAIVRTLSRGETIFCD
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Template Sequence  LDEDL. . . . . . . . . . . . . . . . . . . . . . . . . NVVXTIKEGEVVFRS
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TT
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TT
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   344.... .350.........360...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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