Job Description Q46806 Confidence 100.00% Date Thu Jan 5 12:34:31 GMT 2012 Rank 5 Aligned Residues 453 % Identity 38% Template c1nfgA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:d-hydantoinase; PDBTitle: structure of d-hydantoinase Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	V	L	I	K	N	G	T	V	V	N	A	D	G	Q	A	K	Q	D	L	L	I	E	S	G	I	V	R	Q	L	G	N	N	I	S	P	Q	L	P	Y	E	E	I	D	A	T	G	C	Y	V	F	P	G	G	V	D	V	H	T	H	F	N	I	D	V	G	I	A	R	S	C	D	D	F	F	T	G	T	R
Query Conservation
Alig confidence																																				.	.
Template Conservation																																				.	.
Template Sequence		M	D	I	I	I	K	N	G	T	I	V	T	A	D	G	I	S	R	A	D	L	G	I	K	D	G	K	I	T	Q	I	G	G	A	.	.	L	G	P	A	E	R	T	I	D	A	A	G	R	Y	V	F	P	G	G	I	D	V	H	T	H	V	E	T	V	S	F	N	T	Q	S	A	D	T	F	A	T	A	T	V
Template Known Secondary structure														T	T											T	T						S	S		.	.					S						T	T															S				T	T				S
Template Predicted Secondary structure																																				.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		A	A	A	C	G	G	T	T	T	I	I	D	H	M	G	F	G	P	N	G	C	R	L	R	H	Q	L	E	V	Y	R	G	Y	A	A	H	K	A	V	I	D	Y	S	F	H	G	V	I	Q	H	I	N	H	A	I	L	D	E	I	P	M	I	V	E	E	G	L	S	S	F	K	L	Y	L	T	.	Y	Q	Y	K
Query Conservation																																																																													.
Alig confidence																			.																																																										.
Template Conservation																			.
Template Sequence		A	A	A	C	G	G	T	T	T	I	V	D	F	C	Q	Q	D	.	R	G	H	S	L	A	E	A	V	A	K	W	D	G	M	A	G	G	K	S	A	I	D	Y	G	Y	H	I	I	V	L	D	P	T	D	S	V	I	E	E	L	E	V	L	P	D	L	G	I	T	S	F	V	F	M	A	Y	R	G	M	N	M
Template Known Secondary structure						T	T												.	T	T	S														T	T	T		S	S									S	S									T	T	T	G	G	G	G	T			B			B	S	S	S	T	T	T	T	B
Template Predicted Secondary structure																			.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	D	D	E	V	L	Q	A	L	R	R	L	H	E	S	G	A	L	T	T	V	H	P	E	N	D	A	A	I	A	S	K	R	A	E	F	I	A	A	G	L	T	A	P	R	Y	H	A	L	S	R	P	L	E	C	E	A	E	A	I	A	R	M	I	N	L	A	Q	I	A	G	N	A	P	L	Y	I	V	H
Query Conservation
Alig confidence																																																																										.
Template Conservation																																																																										.
Template Sequence		I	D	D	V	T	L	L	K	T	L	D	K	A	V	K	T	G	S	L	V	M	V	H	A	E	N	G	D	A	A	D	Y	L	R	D	K	F	V	A	E	G	K	T	A	P	I	Y	H	A	L	S	R	P	P	R	V	E	A	E	A	T	A	R	A	L	A	L	A	E	I	V	N	.	A	P	I	Y	I	V	H
Template Known Secondary structure																		T		B				B																	T	T			S	T						T	S																				T	.
Template Predicted Secondary structure																																																																										.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.			.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.
Query SS confidence																																								.	.
Query Sequence		L	S	N	G	L	G	L	D	Y	L	R	L	A	R	A	N	H	Q	P	V	W	V	E	T	C	P	Q	Y	L	L	L	D	E	R	S	Y	D	T	.	.	E	D	G	M	K	F	I	L	S	P	P	L	R	N	V	R	E	Q	D	K	L	W	C	G	I	S	D	G	A	I	D	V	V	A	T	D	H	C	T	F
Query Conservation																																								.	.
Alig confidence																																								.	.
Template Conservation
Template Sequence		V	T	C	E	E	S	L	E	E	V	M	R	A	K	S	R	G	V	R	A	L	A	E	T	C	T	H	Y	L	Y	L	T	K	E	D	L	E	R	P	D	F	E	G	A	K	Y	V	F	T	P	P	A	R	A	K	K	D	H	D	V	L	W	N	A	L	R	N	G	V	F	E	T	V	S	S	D	H	C	S	W
Template Known Secondary structure				S														T									G	G	G	G	T			G	G	G	G	G		T	T	T	G	G	G	G	G			S	S																	T	T			S						B
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	M	A	Q	R	L	Q	I	S	K	G	D	F	S	R	C	P	N	G	L	P	G	V	E	N	R	M	Q	L	L	F	S	S	G	V	M	T	G	R	I	T	P	E	R	F	V	E	L	T	S	A	M	P	A	R	L	F	G	L	W	P	Q	K	G	L	L	A	P	G	S	D	G	D	V	V	I	I	D	P	R
Query Conservation
Alig confidence																																		.
Template Conservation																																		.
Template Sequence		L	F	K	G	H	K	D	R	G	R	N	D	F	R	A	I	P	N	G	A	P	G	V	E	E	R	L	M	M	V	Y	Q	.	G	V	N	E	G	R	I	S	L	T	Q	F	V	E	L	V	A	T	R	P	A	K	V	F	G	M	F	P	Q	K	G	T	I	A	V	G	S	D	A	D	I	V	L	W	D	P	E
Template Known Secondary structure			T	T	T	T	T	T	T	T	T	T		G	G	G	S				B			T	T	T								.				T	T	S	S										T							T	T		T	T	T	S	S	S		S	T	T	S	B
Template Predicted Secondary structure																																		.
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	Q	Q	I	Q	H	R	H	L	H	D	N	A	D	Y	S	P	W	E	G	F	T	C	Q	G	A	I	V	R	T	L	S	R	G	E	T	I	F	C	D	G	T	F	T	G	K	A	G	R	G	R	F	L	R	R	K	P	F	V	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	M	V	I	E	Q	T	A	M	H	N	A	M	D	Y	S	S	Y	E	G	H	K	V	K	G	V	P	K	T	V	L	L	R	G	K	V	I	V	D	E	G	S	Y	V	G	E	P	T	D	G	K	F	L	K	R	R	K	Y	K	Q
Template Known Secondary structure								G	G	G	S		S	S		S			T	T	T	T													T	T						T	T						T	T	S			B					S
Template Predicted Secondary structure
Template SS confidence
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.