Return to main results Retrieve Phyre Job Id

Job DescriptionP39377
Confidence99.50%DateThu Jan 5 12:00:10 GMT 2012
Rank86Aligned Residues254
% Identity17%Templated2i9ua2
SCOP infoTIM beta/alpha-barrel Metallo-dependent hydrolases SAH/MTA deaminase-like
Resolution2.05

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   62.......70.........80....... ..90.........100.........110......
Predicted Secondary structure 




















.........................













Query SS confidence 

























. . . . . . . . . . . . . . . . . . . . . . . . .




























Query Sequence  PGFIDQHVHLIGGGGEAGPTTRTPEV. . . . . . . . . . . . . . . . . . . . . . . . . ALSRLTEAGVTSVVGLLGTDSISRHPESL
Query Conservation 




 
 

                .........................     
  




                
Alig confidence 

























.........................




























Template Conservation 




 
 
                                               
  




                
Template Sequence  PGMNDLHAHASQYKNLGIGMDKELLPWLNNYTFPEEAKFLNVDYAKKTYGRLIKDLIKNGTTRVALFATLHKDSTIELFN
Template Known Secondary structure 

GGGGGGTT


SS
TGGGSTT

S
Template Predicted Secondary structure 


























Template SS confidence 















































































   67..70.........80.........90.........100.........110.........120.........130.........140......
 
   117..120.........130.........140.........150....... ..160.........170.........180.........190..
Predicted Secondary structure 















....












Query SS confidence 








































. . . .


































Query Sequence  LAKTRALNEEGISAWMLTGAYHVPSRTITGSVEKDVAIIDR. . . . VIGVKCAISDHRSAAPDVYHLANMAAESRVGGLLG
Query Conservation            
                              ....                                   
Alig confidence 








































....































...
Template Conservation                                                                          
   
...
Template Sequence  MLIKSGIGAYVGKVNMDYNCPDYLTENYITSLNDTEEIILKYKDKSNIVKPIITPRFVPSCSNELMDGLGKLSYKYR. . .
Template Known Secondary structure  T



SS

TTS


TTT
SS
B

GGG

T...
Template Predicted Secondary structure 






























...
Template SS confidence 















































































   147..150.........160.........170.........180.........190.........200.........210.........220...
 
   193......200.........210..... ....220.........230.........240.........250.........260.
Predicted Secondary structure 






...........



















Query SS confidence 






















. . . . . . . . . . .













































Query Sequence  GKPGVTVFHMGDSKKALQPIYDL. . . . . . . . . . . LENCDVPISKLLPTHVNRNVPLFEQALEFARKGGTIDITSSIDEPV
Query Conservation                         ...........                                              
Alig confidence  ...



















...........




















..





















.
Template Conservation  ...                                             
      ..                
     .
Template Sequence  . . . LPVQSHLSENLDEIAVVKSLHKKSNFYGEVYDKFGLFGNTPTLMAHCIHSSK. . EEINLIKRNNVTIVHCPTSNFN.
Template Known Secondary structure  ...

S


TT
SSTT
SSSS


S

..TT

.
Template Predicted Secondary structure  ...






















..




.
Template SS confidence 















































































   224.....230.........240.........250.........260.........270..... ....280.........290.......
 
   262.......270.........280.........290.........300...... ...310......... 320.....
Predicted Secondary structure 


























................



Query SS confidence 












































. . . .












. . . . . . . . . . . .





Query Sequence  APAEGIARAVQAGIPLARVTLSSDGNGSQPFFDDEGNLTHIGVAG. . . . FETLLETVQVLVK. . . . . . . . . . . . DYDFSI
Query Conservation                                           
   ....             ............  


 
Alig confidence  .....................























....












............





Template Conservation  .....................          
  


 
  


                                


 
Template Sequence  . . . . . . . . . . . . . . . . . . . . . LGSGMMPVRKYLNLGINVVLGSDISAGHTCSLFKVIAYAIQNSKIKWQESGKKDMFLST
Template Known Secondary structure  .....................TT




TT



BTTB

S
TTS
S



Template Predicted Secondary structure  .....................






























Template SS confidence 















































































   298.300.........310.........320.........330.........340.........350......
 
   326...330.........340.......
Predicted Secondary structure 






Query SS confidence 





















Query Sequence  SDALRPLTSSVAGFLNLTGKGE
Query Conservation   


   
   
  

    
 
Alig confidence 















..



Template Conservation   


  

   
  

..
 

Template Sequence  SEAFYMATKKGGSFFG. . KVGS
Template Known Secondary structure  TTTTS..S


Template Predicted Secondary structure 

..



Template SS confidence 





















   357..360.........370.. ....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions