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Job DescriptionP39377
Confidence99.41%DateThu Jan 5 12:00:10 GMT 2012
Rank95Aligned Residues268
% Identity18%Templated1yrra2
SCOP infoTIM beta/alpha-barrel Metallo-dependent hydrolases N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   63......70.........80 .........90.........100.........110.........120....... ..130......
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Query Sequence  GFIDQHVHLIGGGGEAGP. . . . TTRTPEVALSRLTEAGVTSVVGLLGTDSISRHPESLLAKTRALNEEG. . ISAWMLTGA
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Template Sequence  GFIDVQLNGCGGVQFNDTAEAVSVETLEIMQKANEKSGCTNYLPTLITTSDELMKQGVRVMREYLAKHPNQALGLHLEGP
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STTSSSSTTTSSTT



TTSB


S
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   54.....60.........70.........80.........90.........100.........110.........120.........130...
 
   137.. 140.........150.........160.........170.........180.........190.........200.........210
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Query Sequence  YHV. . . . . . PSRTITGSVEKDVAIIDRVIGVKCAISDHRSAAPDVYHLANMAAESRVGGLLGGKPGVTVFHMGDSKKALQ
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Template Sequence  WLNLVKKTHNPNFVRKPDAALVDFLCENADV. ITKVTLAPEMVPAEVISKLANAG. . . . . . . . . . . . IVVSAGHSNATLK
Template Known Secondary structure  S


S




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   134.....140.........150.........160.... .....170.........180....... ..190.........200
 
   211........220.........230.........240.........250.........260.........270.........280.........290
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Query Sequence  PIYDLLENCDVPISKLLPTHVNRNVPLFEQALEFARKGGTIDITSSIDEPVAPAEGIARAVQAGIPLARVTLSSDGNGSQ
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Template Sequence  EAKAGFRAGITFATHLYNAMPYITGREPGLAGAILDEAD. IYCGIIADGLHVDYANIRNAKRLK. G. DKLCLVTDATAPA
Template Known Secondary structure  T

SSTTTTS



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.G.GG

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   202.......210.........220.........230.........240 .........250.........260.... . ....270........
 
   291........300.... .....310.........320.........330.........340..... .
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Query Sequence  PFFDDEGNLTHIGV. . . . . . . . . . . . . . . AGFETLLETVQVLVKDYDFSISDALRPLTSSVAGFLNLTGK. G
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Template Sequence  GANIEQFIFAGKTIYYRNGLCVDENGTLSGSSLTMIEGVRNLVEHCGIALDEVLRMATLYPARAIGVEKRLG
Template Known Secondary structure  TS

STT
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TT

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   279280.........290.........300.........310.........320.........330.........340.........350
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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