Job Description P39377 Confidence 99.51% Date Thu Jan 5 12:00:10 GMT 2012 Rank 83 Aligned Residues 272 % Identity 16% Template d1o12a2 SCOP info TIM beta/alpha-barrel Metallo-dependent hydrolases N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain Resolution 2.50

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.				130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.
Query SS confidence																																																																					.	.	.
Query Sequence		G	F	I	D	Q	H	V	H	L	I	G	G	G	G	E	A	G	P	T	T	R	T	P	E	V	A	L	S	R	L	T	E	A	G	V	T	S	V	V	G	L	L	G	T	D	S	I	S	R	H	P	E	S	L	L	A	K	T	R	A	L	N	E	E	G	I	S	.	.	.	A	W	M	L	T	G	A	Y	H	V
Query Conservation																																																																					.	.	.
Alig confidence																.	.	.																																																			.	.	.
Template Conservation																.	.	.
Template Sequence		G	F	V	D	P	H	I	H	G	V	V	G	A	D	.	.	.	T	X	N	C	D	F	S	E	X	E	E	F	L	Y	S	Q	G	V	T	T	F	L	A	T	T	V	S	T	S	L	E	K	X	K	E	I	L	R	K	A	R	D	Y	I	L	E	N	P	S	T	S	L	L	G	V	H	L	E	G	P	Y	I	S
Template Known Secondary structure												T	T			.	.	.	T	T	T	T											T	T	T										S																					T	T		S									S	S	S
Template Predicted Secondary structure																.	.	.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.				.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	R	T	I	T	G	S	V	E	K	D	V	A	I	I	D	R	V	I	G	V	K	C	A	I	S	D	H	R	S	A	A	P	D	V	Y	H	L	A	N	M	A	A	E	S	R	V	G	G	L	L	G	G	K	P	G	V	T	V	F	H	M	G	D	S	K	K	A	L	Q	P	I	Y	D	L	L	E	N	C
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.
Template Sequence		K	E	K	K	G	A	H	S	E	K	H	I	R	P	P	S	E	R	E	L	S	E	I	D	S	P	A	K	X	L	T	F	A	P	E	I	E	.	.	.	.	.	.	.	.	.	S	S	E	L	L	L	R	L	V	K	R	D	I	V	L	S	A	G	H	S	I	A	T	F	E	E	F	X	K	F	Y	K	E	G
Template Known Secondary structure		G	G	G		T	T	S		T	T	T										T	T			T	T								T	T	S	T	.	.	.	.	.	.	.	.	.	T	G	G	G	G	G	G	G	G	G	G	T							S	B												T	T	T
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.										.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		D	V	P	I	S	K	L	L	P	.	T	H	V	N	R	N	V	P	L	F	E	Q	A	L	E	F	A	R	K	G	G	T	I	D	I	T	S	S	I	D	E	P	V	A	P	A	E	G	I	A	R	A	V	Q	A	G	I	P	L	A	R	V	T	L	S	S	D	G	N	G	S	Q	P	F	F	D	D	E	G	N
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		V	K	R	I	T	H	F	P	N	G	L	K	P	L	H	H	R	E	I	G	I	T	G	A	G	L	L	L	D	D	V	K	L	E	L	I	C	D	G	V	H	L	S	R	E	X	V	K	L	V	Y	K	V	K	K	A	N	G	I	V	L	V	T	D	S	I	S	A	A	G	L	K	D	G	T	T	T	L	G	D
Template Known Secondary structure						S	S	T	T	T	T	B					S	S												T	T								S	S	S	S	S													T	G	G	G							B		T	T	T	T	S		S					S	S	S
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		299													300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	.	.	.	.	.	.	.	.	.	.	.	.	T	H	I	G	V	A	G	F	E	T	L	L	E	T	V	Q	V	L	V	K	D	Y	D	F	S	I	S	D	A	L	R	P	L	T	S	S	V	A	G	F	L	N	L	T	G	K	G
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	V	V	K	V	K	D	G	V	P	R	L	E	D	G	T	L	A	G	S	T	L	F	F	S	Q	A	V	K	N	F	R	K	F	T	G	C	S	I	T	E	L	A	K	V	S	S	Y	N	S	C	V	E	L	G	L	D	D	R	G
Template Known Secondary structure		S						T	T					T	T	S		B			B																											T							T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions