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Job DescriptionP39377
Confidence100.00%DateThu Jan 5 12:00:10 GMT 2012
Rank22Aligned Residues351
% Identity20%Templatec3mpgB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:dihydroorotase; PDBTitle: dihydroorotase from bacillus anthracis
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  TLLQGAHLYAPED. RGICDVLVANGKIIAVASNIPSDIVPNCTVVDLSGQILCPGFIDQHVHLIGGGGEAGPTTRTPEVA
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Template Sequence  YLFKNGRYMNEEGKIVATDLLVQDGKIAKVAENIT. . . ADNAEVIDVNGKLIAPGLVDVHVHLREPGGE. . . HKETIETG
Template Known Secondary structure 
TTS
SSBTT

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TTS
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   3......10.........20.........30....... ..40.........50.........60........ .70......
 
   8990.........100.........110.........120.........130.........140.........150.........160........
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Query Sequence  LSRLTEAGVTSVVGLLGTDSISRHPESLLAKTRALNEEGISAWMLTGAYHVPSRTITGSVEKDVAIIDRVIGVKCAISDH
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Template Sequence  TLAAAKGGFTTICAMPNTRPVPDCREHMEDLQNRIKEKAHVNVLPYGAITVRQAGSEMTDFETLKELG. . . . . AFAFTDD
Template Known Secondary structure  TT
S
SSS
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SS
SS
SBGGG
SSSB

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   77..80.........90.........100.........110.........120.........130.........140.... .....150.
 
   169170.........180..... ....190.........200..
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Query Sequence  RSAAPDVYHLANMAAES. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RVGGLLGGKPGVTVFHM
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Template Conservation                                                                      
           
Template Sequence  GVGVQDASMMLAAMKRAAKLNMAVVAHCEENTLINKGCVHEGKFSEKHGLNGIPSVCESVHIARDILLAEAADCHYHVCH
Template Known Secondary structure  TS



TT




GGG
TT
STTTT


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   152.......160.........170.........180.........190.........200.........210.........220.........230.
 
   203......210.........220.........230.........240.........250.........260.........270.........280..
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Query Sequence  GDSKKALQPIYDLLENCDVPISKLLPTHVNRNVPLFEQALEFARKGGTIDITSSIDEPVAPAEGIARAVQAGIPLARVTL
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Template Conservation                                               .......                   
     


Template Sequence  VSTKGSVRVIRDAKRAGIKVTAEVTPHHLVLCEDDIPSADPNFKM. . . . . . . NPPLRGKEDHEALIEGLLDGTIDMIATD
Template Known Secondary structure 


T




GGG

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GGG

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   232.......240.........250.........260.........270...... ...280.........290.........300....
 
   283......290.........300.........310.........320.........330.........340.........350.........360..
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Query Sequence  SSDGNGSQPFFDDEGNLTHIGVAGFETLLETVQVLVKDYDFSISDALRPLTSSVAGFLNLTGKGEILPGNDADLLVMTPE
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Template Sequence  HAPHTAEEKAQGIERAPFGIT. GFETAFPLLYTNLVKKGIITLEQLIQFLTEKPADTFGL. EAGRLKEGRTADITIIDLE
Template Known Secondary structure  B



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TTTS




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TTTTTTTTSS
TTTT
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   305....310.........320..... ....330.........340.........350.........360... ......370.........380..
 
   363 ......370.........380
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Query Sequence  L. . . . . . . . . . . . . . . . . . . . . . . . . RIEQVYARGKLMVKDGK
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Template Sequence  QEEEIDPTTFLSKGKNTPFAGWKCQGWPVMTIVGGKIAWQKES
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GGG
SSS



TTTT


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   383......390.........400.........410.........420.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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