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Job DescriptionP39377
Confidence98.51%DateThu Jan 5 12:00:10 GMT 2012
Rank121Aligned Residues269
% Identity15%Templatec3k2gA_
PDB info PDB header:resiniferatoxin binding proteinChain: A: PDB Molecule:resiniferatoxin-binding, phosphotriesterase- PDBTitle: crystal structure of a resiniferatoxin-binding protein from2 rhodobacter sphaeroides
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   63......70..... ....80.........90.........100.....
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Query Sequence  GFIDQHVHLIGGG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GEAGPTTRTPEVALSRLTEAGVTSVVGLLG
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Template Sequence  GHTLXHEHLQNDCRCWWNPPQEPERQYLAEAPISIEILSELRQDPFVNKHNIALDDLDLAIAEVKQFAAVGGRSIVDPTC
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SSS

SS
GGG




SGGGTS


GGGT
GGG
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TT




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   27..30.........40.........50.........60.........70.........80.........90.........100......
 
   106...110.........120.........130........ .140.........150.........160.........170...
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Query Sequence  TDSISRHPESLLAKTRALNEEGISAWMLTGAYH. . . . . . . . . . VPSRTITGSVEKDVAIIDRVIGVKCAISDHRSAAP. .
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Template Sequence  RG. IGRDPVKLRRISA. . . ETGVQVVXGAGYYLASSXPETAARLSADDIADEIVAEALEGTDGTDARIGLIGEIGVSSDF
Template Known Secondary structure  BT.TT

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SB

GGG

GGGGT

T
BTTBS


SS

TT
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   107. .110.........120. ........130.........140.........150.........160.........170.........180..
 
   174.....180.........190.........200.........210.........220.........230.........240.........250...
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Query Sequence  DVYHLANMAAESRVGGLLGGKPGVTVFHMGDSKKALQPIYDLLENCDVPISKLLPTHVNRNVPLFEQALEFARKGGTIDI
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Template Sequence  TAEEEKSLRGAARAQVRT. . . GLPLXVHLPGWFRLAHRVLDLVEEEGADLRHTVLCHXNPSHXDPVYQATLAQRGAFLEF
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TTS

TT

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GGGTT
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   183......190.........200 .........210.........220.........230.........240.........250.........
 
   254.....260... ......270.........280.........290.........300.........310.........320.
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Query Sequence  TSSIDEPVAP. . . . . . . . . . . . AEGIARAVQAGIPLARVTLSSDGNGSQPFFDDEGNLTHIGVAGFETLLETVQVLVKDY
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Template Sequence  DXIGXDFFYADQGVQCPSDDEVARAILGLADHG. YLDRILLSHDVFVKXXLTRYGGN. . . . . . . GYAFVTKHFLPRLRRH
Template Known Secondary structure 

TT


TTTT


TT.
GGG




SGGGSGGGTS
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   260.........270.........280.........290.. .......300.........310..... ....320.........330.
 
   322.......330.........340......
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Query Sequence  DFSISDALRPLTSSVAGFLNLTGKG
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Template Sequence  GLDDAALETLXVTNPRRVFDASIEG
Template Known Secondary structure  T

T
TTS

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   332.......340.........350......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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