Job Description P39377 Confidence 97.39% Date Thu Jan 5 12:00:10 GMT 2012 Rank 136 Aligned Residues 226 % Identity 16% Template c3guwB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein af_1765; PDBTitle: crystal structure of the tatd-like protein (af1765) from2 archaeoglobus fulgidus, northeast structural genomics3 consortium target gr121 Resolution 3.20 Å

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.								.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.
Query Sequence		F	I	D	Q	H	V	H	L	I	G	G	G	G	E	A	G	P	T	T	R	T	P	E	V	A	L	S	R	L	T	E	A	G	V	T	S	V	V	G	L	L	G	T	D	S	I	S	R	H	P	E	S	L	L	A	K	T	R	A	L	N	.	.	.	.	.	.	.	E	E	G	I	S	A	W	M	L	T	G	A
Query Conservation																																																															.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	F	D	S	H	L	H	S	.	.	.	.	.	.	.	.	.	.	E	G	L	G	F	S	E	L	V	K	L	K	E	N	G	I	K	E	V	C	S	L	A	F	F	P	V	K	P	K	Y	P	Q	T	X	I	D	V	F	R	K	L	T	E	F	E	P	L	R	C	E	A	A	G	V	K	X	H	P	A	V	G
Template Known Secondary structure									G	.	.	.	.	.	.	.	.	.	.	G	G											T	T	S							B				S	S			S	S														T							T	T	T						B
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.											10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	H	V	P	S	R	T	I	T	G	S	V	E	K	D	V	A	I	I	D	R	V	I	G	V	K	C	A	I	S	D	H	R	S	A	A	P	D	V	Y	H	L	A	N	M	A	A	E	S	R	V	G	G	L	L	G	G	K	P	G	V	T	V	F	H	M	G	D	S	K	K	A	L	Q	P	I	Y	D	L	L
Query Conservation
Alig confidence																																				.	.	.	.	.
Template Conservation																																				.	.	.	.	.
Template Sequence		I	H	P	R	C	I	P	P	D	Y	E	F	V	L	G	Y	L	E	E	G	E	W	V	A	F	G	E	I	G	L	E	L	V	T	.	.	.	.	.	D	E	E	I	E	V	L	K	S	Q	L	E	L	A	K	R	X	D	V	P	C	I	I	H	T	P	R	G	N	K	L	K	A	T	R	K	T	L	E	I	L
Template Known Secondary structure				G	G	G			T	T	T								T	T	S			S								S	S			.	.	.	.	.																		T									S	S	S	T	T
Template Predicted Secondary structure																																				.	.	.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.						.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	C	D	V	P	I	S	K	L	L	P	T	H	V	N	R	N	V	P	L	F	E	Q	A	L	E	F	A	R	K	G	G	T	I	D	I	T	S	S	I	D	E	P	V	A	P	A	E	G	I	A	R	A	V	Q	A	G	I	P	L	A	R	V	T	L	S	S	D	G	N	G	S	Q	P	F	F	D	D	E
Query Conservation
Alig confidence																			.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	S	L	D	F	P	A	D	L	A	V	I	D	H	V	N	F	.	.	.	.	.	E	T	L	D	X	V	L	E	T	E	Y	W	I	G	L	T	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	D	A	A	R	I	V	A	E	H
Template Known Secondary structure				T	T			T	T	S					S			T	.	.	.	.	.	T	T						T	S	S	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	G	G	G	G
Template Predicted Secondary structure																			.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.						.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180																																.	.	.	.	.	.	.	.	.	190
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	L	T	H	I	G	V	A	G	F	E	T	L	L	E	T	V	Q	V	L	V	K	D	Y	D	F	S	I	S	D	A	L	R	P	L	T	S	S	V	A	G	F	L	N	L
Query Conservation
Alig confidence																									.	.
Template Conservation																									.	.
Template Sequence		G	E	R	F	X	L	N	S	D	A	G	Y	R	V	A	E	A	A	V	K	I	E	E	.	.	A	V	G	R	E	E	X	E	K	V	A	R	E	N	A	R	K	F	L	R	V
Template Known Secondary structure																			T	T					.	.			T	T	G	G	G	G					S	S					T	T
Template Predicted Secondary structure																									.	.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220			.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions