Job Description P39377 Confidence 100.00% Date Thu Jan 5 12:00:10 GMT 2012 Rank 41 Aligned Residues 353 % Identity 15% Template c3gnhA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:l-lysine, l-arginine carboxypeptidase cc2672; PDBTitle: crystal structure of l-lysine, l-arginine carboxypeptidase cc2672 from2 caulobacter crescentus cb15 complexed with n-methyl phosphonate3 derivative of l-arginine. Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		9	10	.	.	.	.	.	.	.	.	.	20	.	.				.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																.	.	.																																																															.
Query SS confidence																.	.	.																																																															.
Query Sequence		F	T	L	L	Q	G	A	H	L	Y	A	P	E	D	.	.	.	R	G	I	C	D	V	L	V	A	N	G	K	I	I	A	V	A	S	N	I	P	S	D	I	V	P	N	C	T	V	V	D	L	S	G	Q	I	L	C	P	G	F	I	D	Q	H	V	H	L	I	G	G	G	G	E	A	G	P	T	T	R	T	.
Query Conservation																.	.	.																																																															.
Alig confidence																.	.	.																								.																																							.
Template Conservation																																										.
Template Sequence		I	K	A	V	S	A	A	R	L	L	D	V	A	S	G	K	Y	V	D	N	P	L	V	I	V	T	D	G	R	I	T	S	I	G	K	K	G	D	A	V	.	P	A	G	A	T	A	V	D	L	P	G	V	T	L	L	P	G	L	I	D	M	H	V	H	L	D	S	L	A	E	V	G	G	Y	N	S	L	E	Y
Template Known Secondary structure													T	T	T	T					S							T	T								T	T	S			.		T	T																						T	T			T	T			S	G	G	G	G	G	S
Template Predicted Secondary structure																																										.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
										85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	P	E	V	A	L	S	R	L	T	E	A	G	V	T	S	V	V	G	L	L	G	T	D	S	I	S	R	H	P	E	S	L	L	A	K	T	R	A	L	N	E	E	G	I	S	A	W	M	L	T	G	A	Y	H	V	P	S	R	T	I	T	G	S	V	E	K	D	V	A	I	I	D
Query Conservation		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																												.	.	.																													.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.																													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	D	R	F	W	S	V	V	Q	T	A	N	A	K	K	T	L	E	A	G	F	T	T	V	R	N	V	G	A	A	D	Y	D	D	V	.	.	.	G	L	R	E	A	I	D	A	G	Y	V	P	G	P	R	I	V	T	A	A	I	S	F	G	A	T	G	G	.	.	.	.	.	.	.	.	.	.	.	H	C	D
Template Known Secondary structure																				T	T										S	T	T				.	.	.								T	T	S	S										S			B	S	T	T	S	.	.	.	.	.	.	.	.	.	.	.	T	T	S
Template Predicted Secondary structure																																					.	.	.																													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.				.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170												.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.									.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.
Query Sequence		R	V	I	G	V	K	C	A	I	S	D	H	R	S	A	A	P	D	V	Y	H	L	A	N	M	A	A	E	S	R	V	G	G	L	L	G	G	K	P	G	V	T	V	F	H	M	G	D	S	.	.	.	.	.	.	.	.	K	K	A	L	Q	P	I	Y	D	L	L	E	N	C	D	V	P	I	S	K	L	L	P
Query Conservation																																																			.	.	.	.	.	.	.	.
Alig confidence																																																			.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	T	F	F	P	P	S	M	D	Q	K	N	P	F	N	S	D	S	P	D	E	A	R	K	A	V	R	T	L	K	K	Y	G	A	Q	V	I	I	C	A	T	G	G	V	F	S	R	G	N	E	P	G	Q	Q	Q	L	T	Y	E	E	M	K	A	V	V	D	E	A	H	M	A	G	I	K	V	A	A	H	A	H
Template Known Secondary structure				S	S		G	G	G					T	T				S														T	T		S	B			B		B			S	S	S	S	S			T	T		B		S															T	T		B
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		229														230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	.	.	.	.	.	.	.	.	.	.	.	.	.	H	V	N	R	N	V	P	L	F	E	Q	A	L	E	F	A	R	K	G	G	T	I	D	I	T	S	S	I	D	E	P	V	A	P	A	E	G	I	A	R	A	V	Q	A	G	I	P	L	A	R	V	T	L	S	S	D	G	N	G	S	Q	P	F	F	D	D
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	A	S	G	I	R	E	A	V	R	A	G	V	D	T	I	E	H	A	S	L	V	D	D	E	G	I	K	L	A	V	Q	K	G	A	Y	F	S	M	D	I	Y	N	T	D	Y	T	Q	A	E	G	K	K	N	G	V	L	E	D	N	L	R	K	D	R	D	I	G	E	L	Q	R	E	N	F	R	K	A	L	K
Template Known Secondary structure		S										T	T		S						T	T													T								S	T												T
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		296	.	.	.	300	.	.	.	.	.	.	.	.	.				310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.		.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.									.
Predicted Secondary structure																.	.	.																																				.																			.	.	.	.	.	.	.	.
Query SS confidence																.	.	.																																				.																			.	.	.	.	.	.	.	.
Query Sequence		E	G	N	L	T	H	I	G	V	A	G	F	E	T	.	.	.	L	L	E	T	V	Q	V	L	V	K	D	Y	D	F	S	I	S	D	A	L	R	P	L	T	S	S	V	A	G	F	L	N	L	T	G	.	K	G	E	I	L	P	G	N	D	A	D	L	L	V	M	T	P	E	.	.	.	.	.	.	.	.	L
Query Conservation																.	.	.																																				.																			.	.	.	.	.	.	.	.
Alig confidence																.	.	.																																				.																			.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	G	V	K	M	V	Y	G	T	D	A	G	I	Y	P	H	G	D	N	A	K	Q	F	A	V	M	V	R	Y	G	A	T	P	L	Q	A	I	Q	S	A	T	L	T	A	A	E	A	L	G	R	S	K	D	V	G	Q	V	A	V	G	R	Y	G	D	M	I	A	V	A	G	D	P	L	A	D	V	T	T	L	E
Template Known Secondary structure			T									B	T	T	B		T	T		G	G	G								T	T										T	T								T		T	T	T	S	S	S			T	T	S	B							S	S		T	T	T		G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
		364	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	E	Q	V	Y	A	R	G	K	L	M	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	P	V	F	V	M	K	G	G	A	V	V	K
Template Known Secondary structure		S		S					T	T
Template Predicted Secondary structure
Template SS confidence
		415	.	.	.	.	420	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions