Job Description P39377 Confidence 100.00% Date Thu Jan 5 12:00:10 GMT 2012 Rank 28 Aligned Residues 371 % Identity 18% Template c3gipB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:n-acyl-d-glutamate deacylase; PDBTitle: crystal structure of n-acyl-d-glutamate deacylase from2 bordetella bronchiseptica complexed with zinc, acetate and3 formate ions. Resolution 1.50 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.			.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		A	A	G	F	T	L	L	Q	G	A	H	L	Y	A	P	E	D	.	.	R	G	I	C	D	V	L	V	A	N	G	K	I	I	A	V	A	S	N	I	P	S	D	I	V	P	N	C	T	V	V	D	L	S	G	Q	I	L	C	P	G	F	I	D	Q	H	V	H	L	I	G	G	G	G	E	A	G	P	T	T	R
Query Conservation																			.	.
Alig confidence																			.	.																						.	.	.																																			.	.	.
Template Conservation																																										.	.	.																																			.	.	.
Template Sequence		E	K	L	D	F	K	I	T	G	G	W	I	I	D	G	T	G	A	P	R	R	R	A	D	L	G	V	R	D	G	R	I	A	A	I	G	E	L	G	A	.	.	.	H	P	A	R	H	A	W	D	A	S	G	K	I	V	A	P	G	F	I	D	V	H	G	H	D	D	L	M	F	V	E	K	P	D	.	.	.
Template Known Secondary structure				B	S					S	S					S	S	S												T	T									S	S	.	.	.	S		B	S	S					T	T	S									S	S				T	T						T	T	.	.	.
Template Predicted Secondary structure																																										.	.	.																																			.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.				.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	P	E	V	A	L	S	R	L	T	E	A	G	V	T	S	V	V	G	L	L	G	T	D	S	I	S	R	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	L	R	W	K	T	S	Q	G	I	T	T	V	V	V	G	N	C	G	V	S	A	A	P	A	P	L	P	G	N	T	A	A	A	L	A	L	L	G	E	T	P	L	F	A	D	V	P	A	Y	F	A	A	L	D	A	Q	R	P	M	I	N	V	A	A	L	V	G	H	A	N	L	R	L	A	A
Template Known Secondary structure		.	.	.	.	.						T	T	T									T	T			S		S				T	T				G	G	G	G	G	T		S	S				S	S											S			S	S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
														113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.			.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																																																.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																																																																.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	P	E	S	L	L	A	K	T	R	A	L	N	E	E	G	I	S	A	W	M	L	T	G	A	Y	H	V	P	S	R	T	I	T	G	S	V	E	K	D	V	A	I	I	D	R	V	I	G	V	K	C	A	I	S	D	H	R	S	A	A	P	D	V	.	.	Y	H	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																																																.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																																																																.	.
Template Conservation
Template Sequence		M	R	D	P	Q	A	A	P	T	A	A	E	Q	Q	A	M	Q	D	M	L	Q	A	A	L	E	A	G	A	V	G	F	S	T	G	L	A	Y	Q	P	G	A	V	A	Q	A	A	E	L	E	G	L	A	R	V	A	A	E	R	R	R	L	H	T	S	H	I	R	N	E	A	D	G	V	E	A	A	V	E	E	V
Template Known Secondary structure			S	S	T	T	S																					T								T	T	S	T	T	G	G	G																T	T								S		S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	M	A	A	E	S	R	V	G	G	L	L	G	G	K	P	G	V	T	V	F	H	M	G	D	S	K	K	A	L	Q	P	I	Y	D	L	L	E	N	C	D	V	P	I	S	K	L	L	P	T	H	V	N	R	N	V	P	L	F	E	Q	A	L	E	F	A	R	K	G	G	T	I	D	I	T	S	S	I	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	I	G	R	G	T	G	C	A	T	V	V	S	H	H	K	C	M	M	P	Q	N	W	G	R	S	R	A	T	L	A	N	I	D	R	A	R	E	Q	G	V	E	V	A	L	D	I	Y	P	Y	P	G	S	S	T	I	L	I	P	E	R	A	E	T	I	D	D	I	R	I	T	W	S	T	P	H	P	E	C
Template Known Secondary structure															T	T					S	G	G	G	T	T	T															T									S		S								G	G	G	T	T	T	S	S								S	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		259	260	.	.	.	.	.	.	.	.	.	270						.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320													.
Predicted Secondary structure														.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	P	V	A	P	A	E	G	I	A	R	A	.	.	.	.	.	V	Q	A	G	I	P	L	A	R	V	T	L	S	S	D	G	N	G	S	Q	P	F	F	D	D	E	G	N	L	T	H	I	G	V	A	G	F	E	T	L	L	E	T	V	Q	V	L	V	K	D	.	.	.	.	.	.	.	.	.	.	.	.	Y
Query Conservation														.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	G	E	Y	L	A	D	I	A	A	R	W	G	C	D	K	T	T	A	A	R	R	L	A	P	A	G	A	I	Y	F	A	M	D	E	D	E	V	K	R	I	F	Q	H	P	C	C	M	V	G	S	D	G	L	P	N	D	A	R	P	H	P	R	L	W	G	S	F	T	R	V	L	G	R	Y	V	R	E	A	R
Template Known Secondary structure		T	T		B									T	S											S																			S	T	T									T	T		S	S			T																	T
Template Predicted Secondary structure
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.																.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.		.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Query Sequence		D	F	S	I	S	D	A	L	R	P	L	T	S	S	V	A	G	F	L	N	L	T	G	K	G	E	I	L	P	G	N	D	A	D	L	L	V	M	T	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	I	E	Q	V	Y	A	R	G	K	L	M	V	K	D	G	K	A	C	.	V	K	G
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation
Template Sequence		L	M	T	L	E	Q	A	V	A	R	M	T	A	L	P	A	R	V	F	G	F	A	E	R	G	V	L	Q	P	G	A	W	A	D	V	V	V	F	D	P	D	T	V	A	D	R	A	T	W	D	E	P	T	L	A	S	V	G	I	A	G	V	L	V	N	G	A	E	V	F	P	Q	P	P	A	D	G	R	P	G
Template Known Secondary structure		S	S										T								T		T	T		S	S			T	T	S	B								T	T	T		B					S	S	S	T	T				B	S							T	T					S	S			S	S	S
Template Predicted Secondary structure
Template SS confidence
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
		386	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	V
Template Known Secondary structure			B
Template Predicted Secondary structure
Template SS confidence
		474	.