Job Description P39377 Confidence 100.00% Date Thu Jan 5 12:00:10 GMT 2012 Rank 40 Aligned Residues 341 % Identity 22% Template c3feqB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative amidohydrolase; PDBTitle: crystal structure of uncharacterized protein eah89906 Resolution 2.63 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.				.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure															.	.	.
Query SS confidence															.	.	.
Query Sequence		T	L	L	Q	G	A	H	L	Y	A	P	E	D	.	.	.	R	G	I	C	D	V	L	V	A	N	G	K	I	I	A	V	A	S	N	I	P	S	D	I	V	P	N	C	T	V	V	D	L	S	G	Q	I	L	C	P	G	F	I	D	Q	H	V	H	L	I	G	G	G	G	E	A	G	P	T	T	R	T	P	E
Query Conservation															.	.	.
Alig confidence															.	.	.																								.	.
Template Conservation																																									.	.
Template Sequence		T	V	L	Q	G	G	N	V	L	D	L	E	R	G	V	L	L	E	H	H	H	V	V	I	D	G	E	R	I	V	E	V	T	D	R	P	V	D	L	.	.	P	N	A	Q	A	I	D	V	R	G	K	T	V	M	P	G	F	I	D	C	H	V	H	V	L	A	S	N	A	N	L	G	V	N	A	T	Q	P	N
Template Known Secondary structure												T	T	T	T												T	T								S					.	.	S	S							T	T	S													T	T			S	S								S
Template Predicted Secondary structure																																									.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		87	.	.									90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	A	L	.	.	.	.	.	.	.	.	S	R	L	T	E	A	G	V	T	S	V	V	G	L	L	G	T	D	S	I	S	R	H	P	E	S	L	L	A	K	T	R	A	L	N	E	E	G	I	S	A	W	M	L	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation					.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.																				.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.
Template Sequence		I	L	A	A	I	R	S	L	P	I	L	D	A	M	L	S	R	G	F	T	S	V	R	D	A	G	G	A	D	W	.	.	.	.	.	.	S	L	M	Q	A	V	E	T	G	L	V	S	G	P	R	I	F	P	S	G	K	A	L	S	Q	T	G	G	H	G	D	F	R	P	R	L	E	P	C	S	C	C	F	R
Template Known Secondary structure																		T	T							S	S	S				.	.	.	.	.	.								T	T	S	S		S								S					T	T	S	T	T												S
Template Predicted Secondary structure																																.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.							.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
							136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	A	Y	H	V	P	S	R	T	I	T	G	S	V	E	K	D	V	A	I	I	D	R	V	I	G	V	K	C	A	I	S	D	H	R	S	A	A	P	D	V	Y	H	L	A	N	M	A	A	E	S	R	V	G	G	L	L	G	G	K	P	G	V	T	V	F	H	M	G	D	S	K	K	A	L	Q
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.																																																																						.	.	.	.
Template Conservation																																																																												.	.	.	.
Template Sequence		T	G	A	I	A	R	V	V	D	G	V	E	G	V	R	L	A	V	R	E	E	I	Q	K	G	A	T	Q	I	K	I	M	A	S	G	G	V	A	S	P	T	D	P	I	A	N	T	Q	Y	S	E	D	E	I	R	A	I	V	D	E	A	E	A	A	N	T	Y	V	M	A	H	A	Y	T	.	.	.	.	G	R
Template Known Secondary structure		T	T		S						S														T	T		S	S						B			S	S	S	S	S			T	T	S	B		S															T	T										.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.					.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		P	I	Y	D	L	L	E	N	C	D	V	P	I	S	K	L	L	P	T	H	V	N	R	N	V	P	L	F	E	Q	A	L	E	F	A	R	K	G	G	T	I	D	I	T	S	S	I	D	E	P	V	A	P	A	E	G	I	A	R	A	V	Q	A	G	I	P	L	A	R	V	T	L	S	S	D	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.
Template Sequence		A	I	A	R	A	V	R	C	G	V	R	T	I	E	H	G	N	L	V	D	E	.	.	.	.	.	.	.	A	A	A	K	L	M	H	E	H	G	A	F	V	V	P	T	L	.	.	.	.	.	.	.	.	.	V	T	Y	D	A	L	A	K	H	G	A	E	F	G	M	P	P	E	S	V	A	K	V	A	S	V
Template Known Secondary structure										T		S											.	.	.	.	.	.	.										T							T	.	.	.	.	.	.	.	.	.									S	T	G	G	G	T			T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.								.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.										.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
					286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.			.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.		.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																					.	.																																									.
Query SS confidence		.	.	.																					.	.																																									.
Query Sequence		.	.	.	G	N	G	S	Q	P	F	F	D	D	E	G	N	L	T	H	I	G	V	A	.	.	G	F	E	T	L	L	E	T	V	Q	V	L	V	K	D	Y	D	F	S	I	S	D	A	L	R	P	L	T	S	S	V	A	G	F	L	N	L	T	G	K	.	G	E	I	L	P	G	N	D	A	D	L	L	V	M
Query Conservation		.	.	.																					.	.																																									.
Alig confidence		.	.	.																					.	.																																									.
Template Conservation
Template Sequence		Q	Q	K	G	R	E	S	L	E	I	Y	A	N	A	G	V	K	M	G	F	G	S	D	L	L	G	E	M	H	A	F	Q	S	G	E	F	R	I	R	A	E	V	L	G	N	L	E	A	L	R	S	A	T	T	V	A	A	E	I	V	N	M	Q	G	Q	L	G	V	I	A	V	G	A	I	A	D	L	V	V	L
Template Known Secondary structure																T			B								G	G	G	G	G	G	G	G																			T	T							T	T		B	T	T	B	S	S		S	T	T	S	B
Template Predicted Secondary structure
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
		360	.	.													.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	P	E	.	.	.	.	.	.	.	.	.	.	.	.	L	R	I	E	Q	V	Y	A	R	G	K	L	M	V	K	D
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	G	N	P	L	E	D	I	G	V	V	A	D	E	G	A	R	V	E	Y	V	L	Q	R	G	T	L	V	K	R	Q
Template Known Secondary structure		S	S		T	T	T		G	G	G	T	S	S	S	S	S	S							T	T
Template Predicted Secondary structure
Template SS confidence
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions