Job Description P39377 Confidence 100.00% Date Thu Jan 5 12:00:10 GMT 2012 Rank 43 Aligned Residues 354 % Identity 14% Template c3be7B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:zn-dependent arginine carboxypeptidase; PDBTitle: crystal structure of zn-dependent arginine carboxypeptidase Resolution 2.30 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.			.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																.	.																																																																.
Query SS confidence																.	.																																																																.
Query Sequence		F	T	L	L	Q	G	A	H	L	Y	A	P	E	D	.	.	R	G	I	C	D	V	L	V	A	N	G	K	I	I	A	V	A	S	N	I	P	S	D	I	V	P	N	C	T	V	V	D	L	S	G	Q	I	L	C	P	G	F	I	D	Q	H	V	H	L	I	G	G	G	G	E	A	G	P	T	T	R	T	P	.
Query Conservation																.	.																																																																.
Alig confidence																.	.																				.	.	.	.																																									.
Template Conservation																																					.	.	.	.
Template Sequence		D	F	L	I	K	S	K	G	Y	L	D	I	Q	T	G	E	I	I	K	A	D	L	L	I	R	N	G	K	I	A	E	I	G	K	I	.	.	.	.	N	T	K	D	A	T	V	I	S	I	P	D	L	I	L	I	P	G	L	M	D	S	H	V	H	I	V	G	N	D	S	K	G	E	E	S	I	A	D	S	S
Template Known Secondary structure								S					T	T	T												T	T							S		.	.	.	.				S	S						T	T															S	S					S	G	G	G	T	T			T
Template Predicted Secondary structure																																					.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.					40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
									86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure		.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	E	V	A	L	S	R	L	T	E	A	G	V	T	S	V	V	G	L	L	G	T	D	S	I	S	R	H	P	E	S	L	L	A	K	T	R	A	L	N	E	E	G	I	S	A	W	M	L	T	G	A	Y	H	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	M	G	T	V	W	G	V	V	N	A	E	K	T	L	M	A	G	F	T	T	V	R	N	V	G	A	A	N	Y	A	D	V	S	V	R	D	A	I	E	R	G	V	I	N	G	P	T	M	L	V	S	G	P	A	L	G	I	T	G	G	H	C	D	H	N	L	L	P	P	E	F	N	Y	S	S	E	G	V	V
Template Known Secondary structure		T																T	T										S	T	T											T	T	S	S										S		B	B		T	T	S	T	T	S				S		T	T	T					T	T	B
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
				141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	S	R	T	I	T	G	S	V	E	K	D	V	A	I	I	D	R	V	I	G	V	K	C	A	I	S	D	H	R	S	A	A	P	D	V	Y	H	L	A	N	M	A	A	E	S	R	V	G	G	L	L	G	G	K	P	G	V	T	V	F	H	M	G	D	S	K	K	A	L	Q	P	I	Y	D	L	L	E	N
Query Conservation		.	.
Alig confidence		.	.																																																																	.	.	.	.
Template Conservation																																																																				.	.	.	.
Template Sequence		D	S	P	W	E	A	R	K	M	V	R	K	N	R	K	Y	G	A	D	L	I	K	F	C	A	T	G	G	V	M	S	R	N	T	D	V	N	A	K	Q	F	T	L	E	E	M	K	A	I	V	D	E	A	H	N	H	G	M	K	V	A	A	H	A	H	G	.	.	.	.	L	I	G	I	K	A	A	I	K	A
Template Known Secondary structure			S															T		S							B			S	S	S	S	S			T	T	S	B		S															T	T									S	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.					.	.	.	230	.	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	D	V	P	I	S	K	L	L	P	T	H	V	N	R	N	V	P	L	F	E	Q	A	L	E	F	A	R	K	G	G	T	I	D	I	T	S	S	I	D	E	P	V	A	P	A	E	G	I	A	R	A	V	Q	A	G	I	P	L	A	R	V	T	L	S	S	D	G	N	G	S	Q	P	F	F	D	D	E	G	N
Query Conservation
Alig confidence															.	.	.	.	.	.	.																										.
Template Conservation															.	.	.	.	.	.	.																										.
Template Sequence		G	V	D	S	V	E	H	A	S	F	I	D	D	.	.	.	.	.	.	.	E	T	I	D	M	A	I	K	N	N	T	V	L	S	M	D	I	F	V	S	D	Y	I	L	G	.	E	G	A	K	A	G	I	R	E	E	S	L	N	K	E	R	L	V	G	K	K	Q	R	E	N	F	M	N	A	H	R	R	G	A
Template Known Secondary structure		T		S						T	T				.	.	.	.	.	.	.										T								S	T						T	.	T					T																											T
Template Predicted Secondary structure															.	.	.	.	.	.	.																										.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.								250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		299	300	.	.	.	.	.	.	.				.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.									.	.	.	.	.
Predicted Secondary structure											.	.	.																																																								.	.	.	.	.	.	.	.
Query SS confidence											.	.	.																																																								.	.	.	.	.	.	.	.
Query Sequence		L	T	H	I	G	V	A	G	F	.	.	.	E	T	L	L	E	T	V	Q	V	L	V	K	D	Y	D	F	S	I	S	D	A	L	R	P	L	T	S	S	V	A	G	F	L	N	L	T	G	K	G	E	I	L	P	G	N	D	A	D	L	L	V	M	T	P	E	.	.	.	.	.	.	.	.	L	R	I	E	Q
Query Conservation											.	.	.																																																								.	.	.	.	.	.	.	.
Alig confidence											.	.	.																																																								.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	I	T	F	G	T	D	A	G	I	F	D	H	G	D	N	A	K	Q	F	A	Y	M	V	E	W	G	M	T	P	L	E	A	I	Q	A	S	T	I	K	T	A	T	L	F	G	I	E	N	I	G	Q	I	K	E	G	F	D	A	D	I	V	G	V	I	E	N	P	L	A	N	I	R	T	L	E	E	V	A	F
Template Known Secondary structure									B	T	T	B		T	T	G	G	G	G								T	T									T	T	T								T			S		S	S			T	T	S	B							S	S		T	T	T		G	G	G	T	T	S
Template Predicted Secondary structure
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
		368	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Y	A	R	G	K	L	M	V	K	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	M	K	E	G	K	V	Y	K	R	R
Template Known Secondary structure					T	T
Template Predicted Secondary structure
Template SS confidence
		389	390	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions