Job Description P39377 Confidence 100.00% Date Thu Jan 5 12:00:10 GMT 2012 Rank 3 Aligned Residues 366 % Identity 18% Template c2vr2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dihydropyrimidinase; PDBTitle: human dihydropyrimidinase Resolution 2.80 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	L	L	Q	G	A	H	L	Y	A	P	E	D	R	G	I	C	D	V	L	V	A	N	G	K	I	I	A	V	A	S	N	I	P	S	D	I	V	P	N	C	T	V	V	D	L	S	G	Q	I	L	C	P	G	F	I	D	Q	H	V	H	L	I	G	G	G	G	E	A	G	P	T	T	R	T	P	E	V	A
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.																																		.
Template Conservation																																	.	.	.	.	.	.	.	.	.																																		.
Template Sequence		R	L	L	I	R	G	G	R	V	V	N	D	D	F	S	E	V	A	D	V	L	V	E	D	G	V	V	R	A	L	G	.	.	.	.	.	.	.	.	.	H	L	R	V	L	D	A	A	G	K	L	V	L	P	G	G	I	D	T	H	T	H	M	Q	F	P	F	M	G	S	R	S	I	.	D	D	F	H	Q	G
Template Known Secondary structure							S						S	S											T	T							.	.	.	.	.	.	.	.	.								T	T	S													T	T		B		S	S	S	B		S	.			T	T
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.																																		.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.										.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	R	L	T	E	A	G	V	T	S	V	V	G	L	L	G	T	D	S	I	S	R	H	P	E	S	L	L	A	K	T	R	A	L	N	E	E	G	I	S	A	W	M	L	T	G	A	Y	H	V	P	S	R	T	I	T	G	S	V	E	K	D	V	A	I	I	D	R	V	I	G	V	K	C	A	I	S	D	H
Query Conservation
Alig confidence																																																																		.
Template Conservation																																																																		.
Template Sequence		T	K	A	A	L	S	G	G	T	T	M	I	I	D	F	A	I	P	Q	K	G	G	S	L	I	E	A	F	E	T	W	R	S	W	A	D	P	K	V	C	C	D	Y	S	L	H	V	A	V	T	W	W	S	D	Q	V	K	E	E	M	K	I	L	V	.	Q	D	K	G	V	N	S	F	K	M	F	M	A	Y	K
Template Known Secondary structure							T	T	T												T	T															T	T	T		S	S										S		S												.		T	S									S	S	S	T
Template Predicted Secondary structure																																																																		.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.																																																		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	S	A	A	P	D	V	Y	H	L	A	N	M	A	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	R	V	G	G	L	L	G	G	K	P	G	V	T	V
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	L	Y	M	V	T	D	L	E	L	Y	E	A	F	S	R	C	K	E	I	G	A	I	A	Q	V	H	A	E	N	G	D	L	I	A	E	G	A	K	K	M	L	A	L	G	I	T	G	P	E	G	H	E	L	C	R	P	E	A	V	E	A	E	A	T	L	R	A	I	T	I	A	S	A	V	N	C	P	L	Y
Template Known Secondary structure		T	T	T	B																	T								S															T	T			S	T						T	S																				T
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	H	M	G	D	S	K	K	A	L	Q	P	I	Y	D	L	L	E	N	C	D	V	P	I	S	K	L	L	P	T	H	V	N	R	N	V	P	L	F	E	Q	A	L	E	F	A	R	K	G	G	T	I	D	I	T	S	S	I	D	E	P	V	A	P	A	E	G	I	A	R	A	V	Q	A	G	I	P	L	A	R
Query Conservation
Alig confidence																																																					.	.
Template Conservation																																																					.	.
Template Sequence		I	V	H	V	M	S	K	S	A	A	K	V	I	A	D	A	R	R	D	G	K	V	V	Y	G	E	P	I	A	A	S	L	G	T	D	G	T	H	Y	W	N	K	E	W	H	H	A	A	H	H	V	.	.	M	G	P	P	L	R	P	D	P	S	T	P	D	F	L	M	N	L	L	A	N	D	D	L	T	T	T
Template Known Secondary structure																				T	T								B								S	G	G	G	G		S	S						T	T		.	.		S	S				S		T	T											T	T	S	S
Template Predicted Secondary structure																																																					.	.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.			.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.			.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.		.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure																											.	.																																										.
Query SS confidence																											.	.																																										.
Query Sequence		V	T	L	S	S	D	G	N	G	S	Q	P	F	F	D	D	E	G	N	L	T	H	I	G	V	.	.	A	G	F	E	T	L	L	E	T	V	Q	V	L	V	K	D	Y	D	F	S	I	S	D	A	L	R	P	L	T	S	S	V	A	G	F	L	N	L	T	G	K	.	G	E	I	L	P	G	N	D	A	D	L
Query Conservation																											.	.																																										.
Alig confidence																											.	.																																										.
Template Conservation
Template Sequence		G	T	D	N	C	T	F	N	T	C	Q	K	A	L	G	K	D	D	F	T	K	I	P	N	G	V	N	G	V	E	D	R	M	S	V	I	W	E	K	G	V	H	S	G	K	M	D	E	N	R	F	V	A	V	T	S	T	N	A	A	K	I	F	N	L	Y	P	R	K	G	R	I	A	V	G	S	D	A	D	I
Template Known Secondary structure		B			B									G	G	G	S	S		G	G	G	S				B			T	T	T										T	T	T	T	S	S										T							T	T		T	T	T	S	S			S	T	T	S	B
Template Predicted Secondary structure
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
		357	.	.	360	.	.	.																										.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.				.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Query Sequence		L	V	M	T	P	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	I	E	Q	V	Y	A	R	G	K	L	M	V	K	D	G	K	A	C	V	.	.	.	K	G	T	F
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Template Conservation
Template Sequence		V	I	W	D	P	K	G	T	R	T	I	S	A	K	T	H	H	Q	A	V	N	F	N	I	F	E	G	M	V	C	H	G	V	P	L	V	T	I	S	R	G	K	V	V	Y	E	A	G	V	F	S	V	T	A	G	D	G	K	F
Template Known Secondary structure														T	T	T		S	S	S		S			T	T	T	T													T	T						T	T						T	T		S		B
Template Predicted Secondary structure
Template SS confidence
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.