Job Description P39377 Confidence 100.00% Date Thu Jan 5 12:00:10 GMT 2012 Rank 10 Aligned Residues 367 % Identity 19% Template c2gwnA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:dihydroorotase; PDBTitle: the structure of putative dihydroorotase from porphyromonas2 gingivalis. Resolution 1.85 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																									.	.
Query SS confidence																																									.	.
Query Sequence		A	G	F	T	L	L	Q	G	A	H	L	Y	A	P	E	D	R	G	I	C	D	V	L	V	A	N	G	K	I	I	A	V	A	S	N	I	P	S	D	.	.	I	V	P	N	C	T	V	V	D	L	S	G	Q	I	L	C	P	G	F	I	D	Q	H	V	H	L	I	G	G	G	G	E	A	G	P	T	T	R	T
Query Conservation																																									.	.
Alig confidence																																									.	.																																	.	.	.
Template Conservation																																																																											.	.	.
Template Sequence		A	X	K	I	L	L	R	N	A	L	I	T	N	E	G	K	T	F	P	G	S	V	X	I	D	G	A	F	I	S	R	I	I	E	G	E	L	P	A	D	D	N	L	S	A	D	E	V	I	E	C	S	G	L	R	L	F	P	G	C	I	D	D	Q	V	H	F	R	E	P	G	L	T	.	.	.	H	K	A	T
Template Known Secondary structure			S												T	T											T	T								S				T	T			T	T		S						T	T																T	T	T		T	.	.	.	T	T
Template Predicted Secondary structure																																																																											.	.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.				.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	E	V	A	L	S	R	L	T	E	A	G	V	T	S	V	V	G	L	L	G	T	D	S	I	S	R	H	P	E	S	L	L	A	K	T	R	A	L	N	E	E	G	I	S	A	W	M	L	T	G	A	Y	H	V	P	S	R	T	I	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	A	S	E	S	R	A	A	V	A	G	G	V	T	S	F	X	D	X	P	N	T	N	P	P	T	T	X	W	E	R	L	L	E	K	R	Q	I	G	A	D	T	A	W	A	N	Y	G	F	F	F	G	G	T	N	D	N	I	D	E	I	K	R	V	D	K	H	L	V	P	G	L	L	F	L	G	S	S	T	G
Template Known Secondary structure												T	T								S		S	S	S		S		S																S	S										S	S							T			T	T	S		S				B	S	S	S			G
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
																															147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	E	K	D	V	A	I	I	D	R	V	I	G	V	K	C	A	I	S	D	H	R	S	A	A	P	D	V	Y	H	L	A	N	M	A	A	E	S	R	V	G	G	L	L	G	G	K	P	G	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.
Template Conservation																																																																												.	.	.
Template Sequence		N	X	L	V	D	N	K	E	T	L	E	K	I	F	G	E	C	D	L	L	I	A	T	H	C	E	K	E	E	I	I	R	A	N	K	E	H	Y	K	A	K	Y	G	N	D	L	D	I	H	F	H	P	L	I	R	S	E	E	A	C	Y	R	S	S	A	E	A	V	E	L	A	E	R	X	.	.	.	N	A	R
Template Known Secondary structure		G	G	B																S					B																				S				G	G	G					S																				.	.	.	T
Template Predicted Secondary structure																																																																												.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.				.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	F	H	M	G	D	S	K	K	A	L	Q	P	I	Y	D	L	L	E	N	C	D	V	P	I	S	K	L	L	P	T	H	V	N	R	N	V	P	L	F	E	Q	A	L	E	F	A	R	K	G	G	T	I	D	I	T	S	S	I	D	E	P	V	A	P	A	E	G	I	A	R	A	V	Q	A	G	I	P	L
Query Conservation
Alig confidence																																																				.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.
Template Sequence		L	H	I	L	H	L	S	T	E	K	E	L	S	L	F	R	N	D	I	P	T	A	Q	K	R	I	T	S	E	V	C	V	H	H	L	W	F	S	D	T	D	Y	G	R	L	G	N	R	I	K	.	.	.	.	.	.	W	N	P	A	I	K	K	E	S	D	R	E	A	L	R	A	A	V	R	N	G	R	I	D
Template Known Secondary structure										T	G	G	G	G	G	S			S	S		G	G	G		S														G	G	G					G	G	G	G		.	.	.	.	.	.		S	S																		S	S	S
Template Predicted Secondary structure																																																				.	.	.	.	.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.							.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	V	T	L	S	S	D	G	N	G	S	Q	P	F	F	D	D	E	G	N	L	T	H	I	G	V	A	G	F	E	T	L	L	E	T	V	Q	V	L	V	K	D	Y	D	F	S	I	S	D	A	L	R	P	L	T	S	S	V	A	G	F	L	N	L	T	G	K	G	E	I	L	P	G	N	D	A	D	L	L
Query Conservation
Alig confidence										.	.
Template Conservation										.	.
Template Sequence		I	I	A	T	D	H	A	P	.	.	H	L	L	R	E	K	E	G	S	C	L	Q	A	A	S	G	G	P	L	V	Q	H	S	L	L	A	L	L	E	L	C	N	Q	G	I	F	S	I	E	E	I	V	S	K	T	A	H	I	P	A	T	L	F	A	I	E	K	R	G	Y	I	R	P	G	Y	Y	A	D	L	V
Template Known Secondary structure							B			.	.								S		T	T	T	S							T	T	T											T	T	S	S										T								T	B	T	T		S	S			T	T	S	B
Template Predicted Secondary structure										.	.
Template SS confidence
		309	310	.	.	.	.	.	.			.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
		358	.	360	.	.	.																										.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	M	T	P	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	I	E	Q	V	Y	A	R	G	K	L	M	V	K	D	G	K	A	C	V	K	G	T	F
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	V	D	P	S	S	P	H	T	V	S	A	D	N	I	L	S	L	C	G	W	S	P	F	E	G	F	T	F	S	H	S	V	A	Y	T	F	V	N	G	C	L	A	Y	A	K	G	R	L	A	E	S	R	P	T
Template Known Secondary structure					T	T	S						T	T	T			S	T	T				T	T	T	T				S									T	T						T	T				S	S
Template Predicted Secondary structure
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.