Job Description P39377 Confidence 100.00% Date Thu Jan 5 12:00:10 GMT 2012 Rank 36 Aligned Residues 359 % Identity 18% Template c2gokA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:imidazolonepropionase; PDBTitle: crystal structure of the imidazolonepropionase from agrobacterium2 tumefaciens at 1.87 a resolution Resolution 1.87 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.								.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.																							.	.
Query SS confidence																	.	.	.	.	.	.	.																							.	.
Query Sequence		G	F	T	L	L	Q	G	A	H	L	Y	A	P	E	D	.	.	.	.	.	.	.	R	G	I	C	D	V	L	V	A	N	G	K	I	I	A	V	A	S	N	I	P	S	.	.	D	I	V	P	N	C	T	V	V	D	L	S	G	Q	I	L	C	P	G	F	I	D	Q	H	V	H	L	I	G	G	G	G	E	A
Query Conservation																	.	.	.	.	.	.	.																							.	.
Alig confidence																	.	.	.	.	.	.	.																							.	.
Template Conservation
Template Sequence		A	T	A	L	W	R	N	A	Q	L	A	T	L	N	P	A	M	D	G	I	G	A	V	E	N	A	V	I	A	V	R	N	G	R	I	A	F	A	G	P	E	S	D	L	P	D	D	L	S	T	A	D	E	T	T	D	C	G	G	R	W	I	T	P	A	L	I	D	C	H	T	H	L	V	F	G	G	N	R	A
Template Known Secondary structure																T	T	S	S	T	T												T	T								T	T	S			G	G	G	S			S						T	T																	S	S
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		79	80	.	.				.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure						.	.	.
Query SS confidence						.	.	.
Query Sequence		G	P	T	T	.	.	.	R	T	P	E	V	A	L	S	R	L	T	E	A	G	V	T	S	V	V	G	L	L	G	T	D	S	I	S	R	H	P	E	S	L	L	A	K	T	R	A	L	N	E	E	G	I	S	A	W	M	L	T	G	A	Y	H	V	P	S	R	T	I	T	G	S	V	E	K	D	V	A	I	I
Query Conservation						.	.	.
Alig confidence						.	.	.
Template Conservation
Template Sequence		M	E	F	E	M	R	L	N	G	A	T	Y	E	E	I	A	K	A	G	G	G	I	V	S	S	V	R	D	T	R	A	L	S	D	E	V	L	V	A	Q	A	L	P	R	L	D	T	L	L	S	E	G	V	S	T	I	E	I	K	S	G	Y	G	L	D	I	E	T	E	L	K	M	L	R	V	A	R	R	L	E
Template Known Secondary structure									T	T									T	T		S											S																		T	T	T										S			S															T
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.										.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.
Query Sequence		D	R	V	I	G	V	K	C	A	I	S	D	H	R	S	A	A	P	D	.	.	.	.	.	.	.	.	.	V	Y	H	L	A	N	M	A	A	E	S	R	V	G	G	L	L	G	G	K	P	G	V	T	V	F	H	M	G	D	S	K	K	A	L	Q	P	I	Y	D	L	L	E	N	C	D	V	P	I	S	K	L
Query Conservation																					.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	L	R	P	V	R	I	V	T	S	Y	L	A	A	H	A	T	P	A	D	Y	K	G	R	N	A	D	Y	I	T	D	V	V	L	P	G	L	E	K	A	H	A	E	G	L	A	D	A	V	D	G	F	C	E	G	I	A	F	S	V	K	E	I	D	R	V	F	A	A	A	Q	Q	R	G	L	P	V	K	L	H
Template Known Secondary structure		T	T	S	S										T	T				G	G	G	T	T									T											T	T			S							S	T	T	S	B															T	T			B
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.						.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure																																																									.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.
Query Sequence		L	P	T	H	V	N	R	N	V	P	L	F	E	Q	A	L	E	F	A	R	K	G	G	T	I	D	I	T	S	S	I	D	E	P	V	A	P	A	E	G	I	A	R	A	V	Q	A	G	I	P	L	A	R	V	T	.	.	.	.	.	L	S	S	D	G	N	G	S	Q	P	F	F	D	D	E	G	N	L	T	H
Query Conservation																																																									.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.																														.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.
Template Sequence		A	E	Q	L	S	N	L	G	G	A	E	L	A	A	S	Y	N	.	.	.	.	.	.	.	.	.	A	L	S	A	D	H	L	E	Y	L	D	E	T	G	A	K	A	L	A	K	A	G	T	V	A	V	L	L	P	G	A	F	Y	A	L	R	E	K	Q	L	P	P	V	Q	A	L	R	D	A	G	A	E	I	A
Template Known Secondary structure			S	S	S	S		S	S								T	T	.	.	.	.	.	.	.	.	.		S						T	T													T													T	T														T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.										.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
		302	.	.	.	.							.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.		.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.												.
Predicted Secondary structure							.	.	.	.	.	.																																								.																		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.																																								.																		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	G	V	A	G	.	.	.	.	.	.	F	E	T	L	L	E	T	V	Q	V	L	V	K	D	Y	D	F	S	I	S	D	A	L	R	P	L	T	S	S	V	A	G	F	L	N	L	T	G	K	.	G	E	I	L	P	G	N	D	A	D	L	L	V	M	T	P	E	.	.	.	.	.	.	.	.	.	.	.	L
Query Conservation							.	.	.	.	.	.																																								.																		.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.																																								.																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	T	D	C	N	P	G	T	S	P	L	T	S	L	L	L	T	M	N	M	G	A	T	L	F	R	M	T	V	E	E	C	L	T	A	T	T	R	N	A	A	K	A	L	G	L	L	A	E	T	G	T	L	E	A	G	K	S	A	D	F	A	I	W	D	I	E	R	P	A	E	L	V	Y	R	I	G	F	N
Template Known Secondary structure							B	T	T	T	B																											T	T							T	T		T	T	T	S	S	S			T	T	S	B									S	S	T	T						S	S
Template Predicted Secondary structure
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
		364	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	E	Q	V	Y	A	R	G	K	L	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	L	H	A	R	I	F	K	G	Q	K	V
Template Known Secondary structure									T	T
Template Predicted Secondary structure
Template SS confidence
		408	.	410	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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