Job Description P39377 Confidence 100.00% Date Thu Jan 5 12:00:10 GMT 2012 Rank 26 Aligned Residues 360 % Identity 16% Template c2bb0A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:imidazolonepropionase; PDBTitle: structure of imidazolonepropionase from bacillus subtilis Resolution 2.00 Å

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		10	.	.	.	.		.	.	.	.	.	20	.	.	.	.															.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure							.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	L	L	Q	G	.	A	H	L	Y	A	P	E	D	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	C	D	V	L	V	A	N	G	K	I	I	A	V	A	S	N	I	P	S	D	I	V	P	N	C	T	V	V	D	L	S	G	Q	I	L	C	P	G	F	I	D	Q	H	V	H	L	I	G	G
Query Conservation							.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	I	L	I	N	I	G	Q	L	L	T	M	E	S	S	G	P	R	A	G	K	S	M	Q	D	L	H	V	I	E	D	A	V	V	G	I	H	E	Q	K	I	V	F	A	G	Q	K	G	A	E	A	G	Y	E	A	D	E	I	I	D	C	S	G	R	L	V	T	P	G	L	V	D	P	H	T	H	L	V	F	G
Template Known Secondary structure																S	S				G	G	G	G	T														T	T								T	T	T	T	T	T										T	T												B
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.				.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure													.	.	.
Query SS confidence													.	.	.
Query Sequence		G	G	E	A	G	P	T	T	R	T	P	.	.	.	E	V	A	L	S	R	L	T	E	A	G	V	T	S	V	V	G	L	L	G	T	D	S	I	S	R	H	P	E	S	L	L	A	K	T	R	A	L	N	E	E	G	I	S	A	W	M	L	T	G	A	Y	H	V	P	S	R	T	I	T	G	S	V	E	K	D
Query Conservation													.	.	.
Alig confidence													.	.	.
Template Conservation
Template Sequence		G	S	R	E	K	E	M	N	L	K	L	Q	G	I	S	Y	L	D	I	L	A	Q	G	G	G	I	L	S	T	V	K	D	T	R	A	A	S	E	E	E	L	L	Q	K	A	H	F	H	L	Q	R	M	L	S	Y	G	T	T	T	A	E	V	K	S	G	Y	G	L	E	K	E	T	E	L	K	Q	L	R	V	A
Template Known Secondary structure		S			G	G	G						T	T									T	T		T											S																			T	T										S			S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		152	.	.	.	.	.	.						.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.				.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure									.	.	.	.	.																																																	.	.	.
Query SS confidence									.	.	.	.	.																																																	.	.	.
Query Sequence		V	A	I	I	D	R	V	.	.	.	.	.	I	G	V	K	C	A	I	S	D	H	R	S	A	A	P	D	V	Y	H	L	A	N	M	A	A	E	S	R	V	G	G	L	L	G	G	K	P	G	V	T	V	F	H	M	G	D	S	K	.	.	.	K	A	L	Q	P	I	Y	D	L	L	E	N	C	D	V	P	I
Query Conservation									.	.	.	.	.																																																	.	.	.
Alig confidence									.	.	.	.	.																																																	.	.	.
Template Conservation
Template Sequence		K	K	L	H	E	S	Q	P	V	D	L	V	S	T	F	M	G	A	H	A	I	P	P	E	Y	Q	N	D	P	D	D	F	L	D	Q	M	L	S	L	L	P	E	I	K	E	Q	E	L	A	S	F	A	D	I	F	T	E	T	G	V	F	T	V	S	Q	S	R	R	Y	L	Q	K	A	A	E	A	G	F	G	L
Template Known Secondary structure								S	S	S										S	S			G	G	G	T	T											T	T							T	T			S					B	B		T	T	S	B															T	T
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.						.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.
Query Sequence		S	K	L	L	P	T	H	V	N	R	N	V	P	L	F	E	Q	A	L	E	F	A	R	K	G	G	T	I	D	I	T	S	S	I	D	E	P	V	A	P	A	E	G	I	A	R	A	V	Q	A	G	I	P	L	A	R	V	T	.	.	.	.	.	L	S	S	D	G	N	G	S	Q	P	F	F	D	D	E	G	N
Query Conservation																																																												.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.																														.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.
Template Sequence		K	I	H	A	D	E	I	D	P	L	G	G	A	E	L	A	G	K	L	K	.	.	.	.	.	.	.	.	.	A	V	S	A	D	H	L	V	G	T	S	D	E	G	I	K	K	L	A	E	A	G	T	I	A	V	L	L	P	G	T	T	F	Y	L	G	K	S	T	Y	A	R	A	R	A	M	I	D	E	G	V
Template Known Secondary structure							S	S	S			S								T	T	.	.	.	.	.	.	.	.	.		S						T	T													T													T	T													T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.										.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		299	300	.	.	.	.	.	.	.	.							.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.		.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure												.	.	.	.	.	.																																						.																		.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.																																						.																		.	.	.	.	.	.	.	.	.
Query Sequence		L	T	H	I	G	V	A	G	F	E	.	.	.	.	.	.	T	L	L	E	T	V	Q	V	L	V	K	D	Y	D	F	S	I	S	D	A	L	R	P	L	T	S	S	V	A	G	F	L	N	L	T	G	K	.	G	E	I	L	P	G	N	D	A	D	L	L	V	M	T	P	E	.	.	.	.	.	.	.	.	.
Query Conservation												.	.	.	.	.	.																																						.																		.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.																																						.																		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	V	S	L	A	T	D	F	N	P	G	S	S	P	T	E	N	I	Q	L	I	M	S	I	A	A	L	H	L	K	M	T	A	E	E	I	W	H	A	V	T	V	N	A	A	Y	A	I	G	K	G	E	E	A	G	Q	L	K	A	G	R	S	A	D	L	V	I	W	Q	A	P	N	Y	M	Y	I	P	Y	H	Y
Template Known Secondary structure									B	B	T	T	T	B																S											T	T							T	T		T	T	T	S	S			S	T	T	S	B							S	S	S	S	T	T					S
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
				363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	L	R	I	E	Q	V	Y	A	R	G	K	L	M	V	K	D
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		G	V	N	H	V	H	Q	V	M	K	N	G	T	I	V	V	N	R
Template Known Secondary structure		S	S									T	T
Template Predicted Secondary structure
Template SS confidence
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions