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Job DescriptionP39377
Confidence100.00%DateThu Jan 5 12:00:10 GMT 2012
Rank7Aligned Residues364
% Identity16%Templatec1gkrA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:non-atp dependent l-selective hydantoinase; PDBTitle: l-hydantoinase (dihydropyrimidinase) from arthrobacter2 aurescens
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30.........40.........50.........60.........70.........80.........
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Query Sequence  TLLQGAHLYAPEDRGICDVLVANGKIIAVASNIPSDIVPNCTVVDLSGQILCPGFIDQHVHLIGGGGEAGPTTRTPEVAL
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Template Sequence  VIVKNCRLVSSDGITEADILVKDGKVAAISADTS. . DVEASRTIDAGGKFVMPGVVDEHVHIIDMDLKNRY. . GRFELDS
Template Known Secondary structure  TTTTS

T..T


TT




GGGTTTS..

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   4.....10.........20.........30....... ..40.........50.........60.........70.. .......
 
   90.........100.........110.........120.........130.........140.........150.........160.........
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Query Sequence  SRLTEAGVTSVVGLLGTDSISRHPESLLAKTRALNEEGISAWMLTGAYHVPSRTITGSVEKDVAIIDRVIGVKCAISDHR
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Template Sequence  ESAAVGGITTIIEMPITFPPTTTLDAFLEKKKQAGQRLKVDFALYGGGVPGNLPEIRKMHD. . . AGAVGFSMMAASVPGM
Template Known Secondary structure  T
S
SSS
S
S
SSB



TT
...TT

B

BSS
SBTTT
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   80.........90.........100.........110.........120.........130.........140 .........150......
 
   170.........180..... ....190.........200
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Query Sequence  SAAPDVYHLANMAAES. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RVGGLLGGKPGVTVF
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Template Sequence  FDAVSDGELFEIFQEIAACGSVIVVHAENETIIQALQKQIKAAGGKDMAAYEASQPVFQENEAIQRALLLQKEAGCRLIV
Template Known Secondary structure  B
B

T
B


TT

SS


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   158.160.........170.........180.........190.........200.........210.........220.........230.......
 
   201........210.........220.........230.........240.........250.........260.........270.........280
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Query Sequence  HMGDSKKALQPIYDLLENCDVPISKLLPTHVNRNVPLFEQALEFARKGGTIDITSSIDEPVAPAEGIARAVQAGIPLARV
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Template Conservation             
      
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Template Sequence  LHVSNPDGVELIHQAQSEGQDVHCESGPQYLNITTDDAERIGPYM. . . . . . . KVAPPVRSAEMNIRLWEQLENGLIDTLG
Template Known Secondary structure 



STT


S

GGGGGGG.......

SS



T



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   238.240.........250.........260.........270.........280.. .......290.........300.........310
 
   281........290.........300... ......310.........320.........330.........340..... ....350.......
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Query Sequence  TLSSDGNGSQPFFDDEGNLTHIG. . VAGFETLLETVQVLVKDYDFSISDALRPLTSSVAGFLNLTGK. GEILPGNDADLL
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Template Sequence  SDHGGHPVEDKEPGWKDVWKAGNGALGLETSLPMMLTNGVNKGRLSLERLVEVMCEKPAKLFGIYPQKGTLQVGSDADLL
Template Known Secondary structure 




GGGTGGGGT
GGGS


B

TTTTGGGTSS
TT
TTTSSS

TTSB

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   311........320.........330.........340.........350.........360.........370.........380.........390
 
   358.360... ......370.........380.. .....
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Query Sequence  VMTPEL. . . . . . . . . . . . . . . . . . . . . . . . . RIEQVYARGKLMVKDGKAC. . . VKGTF
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Template Sequence  ILDLDIDTKVDASQFRSLHKYSPFDGMPVTGAPVLTMVRGTVVAEKGEVLVEQGFGQF
Template Known Secondary structure  S




GGG
SSS



TTTT


TTTT
S
TT


B
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   391........400.........410.........420.........430.........440........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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