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Job DescriptionP10423
Confidence99.94%DateThu Jan 5 11:32:15 GMT 2012
Rank19Aligned Residues255
% Identity18%Templated1cg2a1
SCOP infoPhosphorylase/hydrolase-like Zn-dependent exopeptidases Bacterial dinuclear zinc exopeptidases
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50..... ....60.........70.........80.........90.........100.......
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Query Sequence  DFANTQARHIATFFPGRMTGTPAEM. . . LSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKSWHNVTGSTVIAAHEGK
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Template Sequence  TDEQPAVIKTLEKLVNIETGTGDAEGIAAAGNFLEAELKNLGFTVTRS. . . . . . . . . . . . . . KSAGLVVGDNIVGKIKGR
Template Known Secondary structure  TS

BTT
TT
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STT

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S
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   37..40.........50.........60.........70.........80.... .....90.........100..
 
   108.110.........120.........130.. .......140.........150........ .160.........170.........180..
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Query Sequence  APQQIIIMAHLDTYAPLSDADADAN. . . LGGLTLQGMDDNAAGLGVMLELAERL. . KNTPTEYGIRFVATSGEEEGKLGA
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Template Sequence  GGKNLLLMSHMDTVYLKGILAKAPFRVEGDKAYGPGIADDKGGNAVILHTLKLLKEYGVRDYGTITVLFNTDEEKGSFGS
Template Known Secondary structure  S




BS

TTS

TT
TTTTTTTT


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GGGTTTTT
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   103......110.........120.........130.........140.........150.........160.........170.........180..
 
   183......190.........200.........210.........220.........230.........240.........250.........260..
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Query Sequence  ENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVKTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCND
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Template Sequence  RDLIQEEAKLAD. . . . YVLSFEPTSAGDEKLSLGTFNAGEGGKKLVDKAVAYYKEA. . . . . . . . . GGTLGVEERTGGGTD
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SB

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   183......190.... .....200.........210.........220.........230.... .....240.........
 
   263......270.........280.........290.........300.........310.........320.........330.........340..
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Query Sequence  AEIFDKAGIAVLSVEATNWNLGNKDGYQQRAKTPAFPAGNSWHDVRLDNHQHIDKALPGRIERRCRDVMRIMLPLVKELA
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Template Sequence  AAYAALSGKPVIESL. . . . . . . . . . . . . . . . . . . . GLPGFGYH. SDKAEYVDIS. . . . . . . . . AIPRRLYMAARLIMDLG
Template Known Secondary structure  GGGS




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TT.SSS

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   363......370....... ..380..... ....390..... ....400.........410..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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