Job Description P10423 Confidence 100.00% Date Thu Jan 5 11:32:15 GMT 2012 Rank 2 Aligned Residues 258 % Identity 20% Template c3pb6X_ PDB info PDB header:transferase Chain: X: PDB Molecule:glutaminyl-peptide cyclotransferase-like protein; PDBTitle: crystal structure of the catalytic domain of human golgi-resident2 glutaminyl cyclase at ph 6.5 Resolution 1.05 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		H	I	A	T	F	F	P	G	R	M	T	G	T	P	A	E	M	L	S	A	D	Y	I	R	Q	Q	F	Q	Q	M	.	.	G	Y	R	S	D	I	R	T	F	N	S	R	Y	I	Y	T	A	R	D	N	R	K	S	W	H	N	V	T	G	S	T	V	I	A	A	H	E	G	K	A	P	Q	Q	I	I	I	M	A
Query Conservation																																.	.
Alig confidence																																.	.													.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.
Template Sequence		Y	L	R	P	L	L	V	V	R	T	P	G	S	P	G	N	L	Q	V	R	K	F	L	E	A	T	L	R	S	L	T	A	G	W	H	V	E	L	D	P	F	T	A	S	.	.	.	.	.	.	.	.	.	T	P	L	G	P	V	D	F	G	N	V	V	A	T	L	D	P	R	A	A	R	H	L	T	L	A	C
Template Known Secondary structure		T	T	G	G	G		S				T	T	S																	S	T	T													.	.	.	.	.	.	.	.	.		T	T												S		T	T	S	S
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140										.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.								.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.									.	.	180	.
Predicted Secondary structure																																												.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Query Sequence		H	L	D	T	Y	A	P	L	S	D	A	D	A	D	A	N	L	G	G	L	T	L	Q	G	M	D	D	N	A	A	G	L	G	V	M	L	E	L	A	E	R	L	.	.	.	.	.	.	.	K	N	T	P	T	E	Y	G	I	R	F	V	A	T	S	G	E	E	E	.	.	.	.	.	.	.	.	G	K	L	G
Query Conservation																																												.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.
Template Sequence		H	Y	D	S	K	L	F	P	.	.	.	.	.	.	.	.	P	G	S	T	P	F	V	G	A	T	D	S	A	V	P	C	A	L	L	L	E	L	A	Q	A	L	D	L	E	L	S	R	A	K	K	Q	A	A	P	V	T	L	Q	L	L	F	L	D	G	E	E	A	L	K	E	W	G	P	K	D	S	L	Y	G
Template Known Secondary structure										.	.	.	.	.	.	.	.	T	T	S						T	T	T	T														T										T	T		S									S			S		S	S			S	T	T	S	S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.									.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.								.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.
Query Sequence		A	E	N	L	L	K	R	M	S	D	T	.	.	.	.	.	.	.	E	K	K	N	T	L	L	V	I	N	L	D	N	L	I	V	G	D	K	L	Y	F	N	S	G	V	K	T	P	E	A	V	R	K	L	T	R	D	R	A	L	A	I	A	R	S	H	G	I	A	A	T	T	N	P	G	L	N	K	N	Y	P
Query Conservation													.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	R	H	L	A	Q	L	M	E	S	I	P	H	S	P	G	P	T	R	I	Q	A	I	E	L	F	M	L	L	D	L	L	G	A	P	N	P	T	F	Y	S	H	F	P	R	T	V	R	W	F	H	R	L	R	S	I	E	K	R	L	H	R	L	N	L	L	Q	S	H	P	Q	E	V	M	Y	F	Q	P	G	E
Template Known Secondary structure												S	B		S	S		S	B	T	T	T	T									S		S	S	S	S			B					G	G	G																	T	T			S	S			S	S		S	S	B		S	S
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	T	G	C	C	N	D	A	E	I	F	D	K	A	G	I	A	V	L	S	V	E	A	T	N	W	N	L	G	N	K	D	G	Y	Q	Q	R	A	K	T	P	A	F	P	A	G	N	S	W	H	D	V	R	L	D	N	H	Q	H	I	D	K	A	L	P	G	R	I	E	R	R	C	R	D	V	M	R	I	M
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.												.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.												.	.	.	.	.	.	.
Template Sequence		P	F	G	S	V	E	D	D	H	I	P	F	L	R	R	G	V	P	V	L	H	L	I	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	F	P	A	V	W	H	.	T	P	A	D	T	E	V	N	L	H	P	.	.	.	.	.	.	.	P	T	V	H	N	L	C	R	I	L
Template Known Secondary structure		S	S				S		T	T					T	T	T									S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S			T	T	T	T	.	S	T	T		S	G	G	G	S			.	.	.	.	.	.	.
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.												.	.	.	.	.	.	.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.																				.	.	.	.	.	350	.		.	.	.	.	.	.	.	.	360	.	.								.	.	.	.	.	.	.	370	.	.
		335	.	.	.	.	340
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	L	V	K	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	F	L	A	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		373	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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