Job Description P10423 Confidence 99.52% Date Thu Jan 5 11:32:15 GMT 2012 Rank 40 Aligned Residues 127 % Identity 18% Template c3khzA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative dipeptidase sacol1801; PDBTitle: crystal structure of r350a mutant of staphylococcus aureus2 metallopeptidase (sapep/dape) in the apo-form Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		T	P	A	E	M	L	S	A	D	Y	I	R	Q	Q	F	Q	Q	M	G	Y	R	S	D	I	R	T	F	N	S	R	Y	I	Y	T	A	R	D	N	R	K	S	W	H	N	V	T	G	S	T	V	I	A	A	H	E	.	G	K	A	P	Q	Q	I	I	I	M	A	H	L	D	T	Y	A	P	L	S	D	A	D	A
Query Conservation																																																									.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	P	G	P	R	K	A	L	D	Y	M	Y	E	I	A	H	R	D	G	F	T	T	H	D	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	I	A	G	R	I	E	A	G	K	G	N	D	V	L	G	I	L	C	H	V	D	V	V	P	A	G	D	G	W	D	S
Template Known Secondary structure																			T	T							T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T									S	S											B					T	T		S	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.																							.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		130	.						.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.			.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure				.	.	.	.	.																												.	.
Query SS confidence				.	.	.	.	.																												.	.
Query Sequence		D	A	.	.	.	.	.	N	L	G	G	L	T	L	Q	G	M	D	D	N	A	A	G	L	G	V	M	L	E	L	A	E	R	L	.	.	K	N	T	P	T	E	Y	G	I	R	F	V	A	T	S	G	E	E	E	G	K	L	G	A	E	N	L	L	K	R	M	S	D	T	E	K	K	N	T	L	L	V	I	N
Query Conservation				.	.	.	.	.																												.	.
Alig confidence				.	.	.	.	.																												.	.																																				.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.
Template Sequence		N	P	F	E	P	V	V	T	E	D	A	I	I	A	R	G	T	L	D	D	K	G	P	T	I	A	A	Y	Y	A	I	K	I	L	E	D	M	N	V	D	W	K	K	R	I	H	M	I	I	G	T	D	E	E	S	D	W	K	C	T	D	R	Y	F	K	T	E	E	M	P	T	.	.	.	.	.	L	G	F	A
Template Known Secondary structure			T	T	S					S	S				S	T	T	S	T	T	T																	T	T				S	S										T	T					T	T	S						S				S	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.						.	.	170	.
		203	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	D
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		172	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions