Return to main results Retrieve Phyre Job Id

Job DescriptionP10423
Confidence99.64%DateThu Jan 5 11:32:15 GMT 2012
Rank30Aligned Residues162
% Identity17%Templatec2pokB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:peptidase, m20/m25/m40 family; PDBTitle: crystal structure of a m20 family metallo peptidase from streptococcus2 pneumoniae
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50.... .....60.........70.........80.........90.........100.......
Predicted Secondary structure 







...


















Query SS confidence 























. . .




















































Query Sequence  DFANTQARHIATFFPGRMTGTPAE. . . MLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKSWHNVTGSTVIAAHEGK
Query Conservation           
      
  

   ...  

 

       
       
                     


    
 
Alig confidence 























...


























.................








Template Conservation         
  
  

 


 
            
   
   
            .................

 
     
Template Sequence  DHVAQHYFEVLRTLISKKSVFAQQVGLKEVANYLGEIFKRVGAEVEIDESYTAP. . . . . . . . . . . . . . . . . FVMAHFKSS
Template Known Secondary structure 
S

BTTTTBSTT

SSSS
.................


Template Predicted Secondary structure 















.................


Template SS confidence 















































































   16...20.........30.........40.........50.........60......... 70........
 
   108. 110.........120...... ...130.........140.........150........ .160.........170......
Predicted Secondary structure 

..











.......

















..










Query SS confidence 

. .
















. . . . . . .































. .

















Query Sequence  AP. . QQIIIMAHLDTYAPLSD. . . . . . . ADADANLGGLTLQGMDDNAAGLGVMLELAERL. . KNTPTEYGIRFVATSGEE
Query Conservation    ..  

  

 

      .......             

 
  

 
 


 

 
..        
 
     

Alig confidence 

..
















.......































..

















Template Conservation        


  
 



      
   

        
 


  
 
      
 
   
          
       

Template Sequence  RPDAKTLIFYNHYDTVPADGDQVWTEDPFTLSVRNGFMYGRGVDDDKGHITARLSALRKYMQHHDDLPVNISFIMEGAEE
Template Known Secondary structure 
TT








SS


SS
TTS
TTSTTTTTTTTT
SS
SSS
GG
Template Predicted Secondary structure 












































Template SS confidence 















































































   7980.........90.........100.........110.........120.........130.........140.........150........
 
   177..180.........190.........200.........210
Predicted Secondary structure 










Query SS confidence 

































Query Sequence  EGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGD
Query Conservation   

 

                  



  
 
 
Alig confidence 
















.















Template Conservation   
  
            .                
Template Sequence  SASTDLDKYLEKHADKL. RGADLLVWEQGTKNAL
Template Known Secondary structure  GTTTTGGGT.TT
S
S

BB
TT
Template Predicted Secondary structure 




.










Template SS confidence 

































   159160.........170..... ....180.........190.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions