Job Description P10423 Confidence 99.27% Date Thu Jan 5 11:32:15 GMT 2012 Rank 58 Aligned Residues 229 % Identity 20% Template c2pe3A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:354aa long hypothetical operon protein frv; PDBTitle: crystal structure of frv operon protein frvx (ph1821)from pyrococcus2 horikoshii ot3 Resolution 2.00 Å

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		A	E	M	L	S	A	D	Y	I	R	Q	Q	F	Q	Q	M	G	Y	R	S	D	I	R	T	F	N	S	R	Y	I	Y	T	A	R	D	N	R	K	S	W	H	N	V	T	G	S	T	V	I	A	A	H	E	G	K	A	P	Q	Q	I	I	I	M	A	H	L	D	T	Y	A	P	L	S	D	A	D	A	D	.	.
Query Conservation																																																																																.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.																							.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Sequence		E	H	L	G	I	R	D	I	V	V	D	V	L	K	E	V	A	D	E	V	K	V	D	K	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	V	I	A	H	F	K	G	S	.	S	P	R	I	M	V	A	A	H	M	D	K	I	G	V	M	V	N	H	I	D	K	D	G
Template Known Secondary structure		G	G	G	T											T	T		S						T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S	.	S	S										B										T	T	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.																					.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
																																																																										131	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	N	L	G	G	L	T	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	L	H	I	V	P	I	G	G	V	L	P	E	T	L	V	A	Q	R	I	R	F	F	T	E	K	G	E	R	Y	G	V	V	G	V	L	P	D	W	D	Q	I	V	V	D	V	G	A	S	S	K	E	E	A	E	E	M	G	F	R	V	G	T	V	G	E	F	A	P	N	F	T	R	L	N	E	H	R	F	A
Template Known Secondary structure									S	S			G	G	G	G	T	T								T	T														T	T						S		S	S							T	T			T	T													S	S	S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	M	D	D	N	A	A	G	L	G	V	M	L	E	L	A	E	R	L	K	N	T	P	T	E	Y	G	I	R	F	V	A	T	S	G	E	E	E	G	K	L	G	A	E	N	L	L	K	R	M	S	D	T	E	K	K	N	T	L	L	V	I	N	L	D	N	L	I	V	G	D	K	L	Y	F	N	S	G	V
Query Conservation
Alig confidence																									.	.
Template Conservation																									.	.
Template Sequence		T	P	Y	L	D	D	R	I	C	L	Y	A	M	I	E	A	A	R	Q	L	G	D	H	.	.	E	A	D	I	Y	I	V	G	S	V	Q	E	E	V	G	L	R	G	A	R	V	A	S	Y	A	I	N	P	E	V	G	I	A	M	D	V	T	F	A	K	Q	P	H	D	K	G	K	I	V	P	E	L	G	K	G
Template Known Secondary structure			T	T																T					.	.	S	S								S	S		T	T	T	S													S													T	T		T	T						T	T	S
Template Predicted Secondary structure																									.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		219	220	.	.	.	.	.	.				.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.			270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure										.	.	.																																												.	.
Query SS confidence										.	.	.																																												.	.
Query Sequence		K	T	P	E	A	V	R	K	.	.	.	L	T	R	D	R	A	L	A	I	A	R	S	H	G	I	A	A	T	T	N	P	G	L	N	K	N	Y	P	K	G	T	G	C	C	N	D	A	E	I	F	D	K	A	.	.	G	I	A	V	L	S	V	E	A	T	N	W	N	L	G	N	K	D	G	Y	Q	Q	R	A
Query Conservation										.	.	.																																												.	.
Alig confidence										.	.	.																							.	.	.	.	.	.	.															.	.														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	V	M	D	V	G	P	N	I	N	P	K	L	R	A	F	A	D	E	V	A	K	K	Y	E	I	P	L	Q	V	E	P	S	.	.	.	.	.	.	.	P	R	P	T	G	T	D	A	N	V	M	Q	I	N	R	E	G	V	A	T	A	V	L	S	I	P	I	R	Y	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							S	T	T	S																T									.	.	.	.	.	.	.		S			S	S	T						T	S	T	T												B	S	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																			.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.								.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	P	A	F	P	A	G	N	S	W	H	D	V	R	L	D	N	H	Q	H	I	D	K	A	L	P	G	R	I	E	R	R	C	R	D	V	M	R	I	M	L	P	L	V	K	E	L	A	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.						.	.	.	.							.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.						.	.	.	.							.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	M	H	S	Q	V	.	.	.	.	E	L	A	D	A	R	.	.	.	.	.	.	.	D	V	D	N	T	I	K	L	A	K	A	L	L	E	E	L	K	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	T	T	S	T	T	.	.	.	.							.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.						.	.	.	.							.	.	.	.	.	.	.
Template SS confidence
												321	.	.	.	.					.	.	.	.	330	.								.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions