Job Description P10423 Confidence 99.34% Date Thu Jan 5 11:32:15 GMT 2012 Rank 55 Aligned Residues 252 % Identity 19% Template c1y0yA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:frv operon protein frvx; PDBTitle: crystal structure of tetrahedral aminopeptidase from p. horikoshii in2 complex with amastatin Resolution 1.60 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	A	R	H	I	A	T	F	F	P	G	R	M	T	G	T	P	A	E	M	L	S	A	D	Y	I	R	Q	Q	F	Q	Q	M	G	Y	R	S	D	I	R	T	F	N	S	R	Y	I	Y	T	A	R	D	N	R	K	S	W	H	N	V	T	G	S	T	V	I	A	A	H	E	G	K	A	P	Q	Q	I	I	I
Query Conservation
Alig confidence										.	.										.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Conservation										.	.										.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Sequence		E	L	L	K	K	V	V	E	.	.	A	P	G	V	S	G	Y	E	F	.	L	G	I	R	D	V	V	I	E	E	I	K	D	Y	V	D	E	V	K	V	D	K	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	V	I	A	H	K	K	G	E	G	P	.	K	V	M	I
Template Known Secondary structure										.	.	S			B	T	T		G	G	.	G	T										G	G	G	S	S						T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S	S		.
Template Predicted Secondary structure										.	.										.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template SS confidence
		10	.	.	.	.	.	.	.			.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50																					.	.	.	.	.	.	.	.	.	60	.		.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	A	H	L	D	T	Y	A	P	L	S	D	A	D	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	H	M	D	Q	I	G	L	M	V	T	H	I	E	K	N	G	F	L	R	V	A	P	I	G	G	V	D	P	K	T	L	I	A	Q	R	F	K	V	W	I	D	K	G	K	F	I	Y	G	V	G	A	S	A	P	D	W	D	Q	I	F	I	D	I	G	A	E	S	K	E	E	A	E	D	M	G	V	K	I
Template Known Secondary structure							B										T	T	S								S	S			G	G	G	T	T	T									T	T													G	G	G						S		S	S							T	T			T
Template Predicted Secondary structure
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
													131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	A	N	L	G	G	L	T	L	Q	G	M	D	D	N	A	A	G	L	G	V	M	L	E	L	A	E	R	L	K	N	T	P	T	E	Y	G	I	R	F	V	A	T	S	G	E	E	E	G	K	L	G	A	E	N	L	L	K	R	M	S	D	T	E	K	K	N	T	L	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																																			.	.
Template Conservation																																															.	.
Template Sequence		G	T	V	I	T	W	D	G	R	L	E	R	L	G	K	H	R	F	V	S	I	A	F	D	D	R	I	A	V	Y	T	I	L	E	V	A	K	Q	L	K	D	A	K	A	D	.	.	V	Y	F	V	A	T	V	Q	E	E	V	G	L	R	G	A	R	T	S	A	F	G	I	E	P	D	Y	G	F	A	I	D	V
Template Known Secondary structure		T													T	T	T					T	T																			S		S	S		.	.							S			T	T	T	S													S
Template Predicted Secondary structure																																															.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.			.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.
Query SS confidence																																																																			.	.
Query Sequence		V	I	N	L	D	N	L	I	V	G	D	K	L	Y	F	N	S	G	V	K	T	P	E	A	V	R	K	L	T	R	D	R	A	L	A	I	A	R	S	H	G	I	A	A	T	T	N	P	G	L	N	K	N	Y	P	K	G	T	G	C	C	N	D	A	E	.	.	I	F	D	K	A	G	I	A	V	L	S	V	E
Query Conservation																																																																			.	.
Alig confidence																																																																			.	.													.
Template Conservation																																																																																	.
Template Sequence		T	I	A	A	D	I	P	G	T	P	E	H	K	Q	V	T	H	L	G	K	G	T	A	I	K	I	M	D	R	S	V	I	C	H	P	T	I	V	R	W	L	E	E	L	A	K	K	H	E	I	P	Y	Q	L	E	I	L	L	G	G	G	T	D	A	G	A	I	H	L	T	K	A	G	V	P	T	G	A	L	.
Template Known Secondary structure							S	T	T			G	G	G					T	T	S									T	T																		T	T									S	S				T					T	T	S	T	T								.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	N	W	N	L	G	N	K	D	G	Y	Q	Q	R	A	K	T	P	A	F	P	A	G	N	S	W	H	D	V	R	L	D	N	H	Q	H	I	D	K	A	L	P	G	R	I	E	R	R	C	R	D	V	M	R	I	M	L	P	L	V	K	E	L	A	K	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.							.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.							.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	P	A	R	Y	I	H	S	N	T	.	.	.	.	E	V	V	D	E	R	.	.	.	.	.	.	.	D	V	D	A	T	V	E	L	M	T	K	A	L	E	N	I	H	E	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					B	S		S	S	S		.	.	.	.							.	.	.	.	.	.	.																G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.							.	.	.	.	.	.	.
Template SS confidence
																						316	.	.	.	320	.	.	.	.	.	.					.	.	.	330	.	.								.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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